Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1161 |
Symbol | |
ID | 4037960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1272089 |
End bp | 1272553 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637976544 |
Product | translation initiation factor 3 |
Protein accession | YP_583316 |
Protein GI | 94310106 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.41261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.930143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAGGGG TTGATAACGA GCAGCTCGGC ATCGTCAAAT TCATGGACGC ACTGCGCCTG GCCGAGGACA AGGACTTGGA TCTCGTGGAG ATCGCGCCCA ACGCGACTCC GCCCGTGGCC CGCATCATGG ACTACGGCAA GTTCAAGTAC GAGGAAGCCA AGCGCGCCCA CGAGGCCAAG CTCAAGCAGA AAATCATCCA GGTCAAGGAA GTGAAATTCC GTCCTGGCAC GGATGATGGC GACTACAACG TCAAGCTGCG CAACTTGCGA CGCTTCCTGG AAGAGGGTGA CAAGACCAAG ATCACGTTGC GCTTCCGTGG CCGTGAAATG GCCCACCAGG AAATCGGCGC GCGCGTGCTC GAGCGTCTGA AGGCTGACCT GGAGGAACTG GGTCAGGTCG AGCAGATGCC GAAGATGGAA GGTCGCCAGA TGGTGATGGT GCTGGCCCCC AAGAAGAAGA AGTGA
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Protein sequence | MVGVDNEQLG IVKFMDALRL AEDKDLDLVE IAPNATPPVA RIMDYGKFKY EEAKRAHEAK LKQKIIQVKE VKFRPGTDDG DYNVKLRNLR RFLEEGDKTK ITLRFRGREM AHQEIGARVL ERLKADLEEL GQVEQMPKME GRQMVMVLAP KKKK
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