| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1118 |
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| Symbol | |
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| ID | 4037916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1219766 |
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| End bp | 1222285 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976500 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_583273 |
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| Protein GI | 94310063 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.220964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.940906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACATT CATATTCGAC TACGGGGAAC CGGGTCGGCG CCGCCGCCCG AGATTACGGA
CGGCGTGGGT CCATGGCCGC GCTTGCGGCC GCCGTCCTGA TGAGCGTGGC CGTGGCACCC
GTCGCTGCCC AAACGCCGCG CGGTGACGTG CCAATCCACA TCGAAGCACA GCCGCTGGCC
GATGCCCTGC TGCAACTCGG CCGCCAGACG TCGCTGCAAC TGTATTTCCC GCCAGAACTG
GTGGCGGGCA AACGGGCGCC CGCCGTGAAC GGCACCATGC GTCCAGAGGC AGCGCTGGAC
TCGCTGCTCA AAGGCAGCGG CATCCAGTAC CAGCGCAGCG GCAACCAAGG CTTCGTGCTG
CGTCCGGTTT CCGCGGCACC AGCCGCTGCA CCGCCGGTGC CATCCGATAC GCTCCACGCC
ACGGCCCAGC CCACCACCGT GCTGGCCCCG GTGGAAGTCA CCGCGTCACG GACATCGAGC
GATCTGGTCC GCCCGACGCG GCAATCGACG GTGCTGGAAC GCACCGAACT CGAGGAACTG
AAAACGGGCT CGGACAGCCT GGCCACGGTG CTGTCCAAGG TGATCCCCGG CATGGCCGAC
TCCAGCCACA CGGTGACAGA CTTCGGCCAG ACACTGCGCG GGCGCGGCAT GCTGGTGCTG
CTCGACGGCA TTCCGCTGAA CACCAATCGA GACTCCGCGC GCAATCTGGC CAATATCGAT
CCGGCACTGG TGGAGCGCGT GGAGGTGCTG CGAGGCAGTA GCGCGATCTA CGGCGGCGGC
GCCACGGGCG GCATCGTCTC AATCACCACC CGGCCAGCCG GCGGCGAGCC CAAGGCCGAT
ACCACGGTGA CGATGTCCAC GCCGCTCTCC CGCCTGCGCG CGGACGGCTT GAGCGCCAAC
GTGCAGCAGC ACTTTTCGGG CAGCAGCGGG ATGCTCGACT ATGCGTTCGA CCTAGGCGCG
CGCCATATCG GCAATTCGTA TGATGCGAAG GGCCAGCGCA TTGCGCCGGA GCCAAGCCAG
GGCGACCTGT TCGACTCGAA CAACTACAAC GTCGGCGGCA AGCTCGGCCT GCGCTTCGCG
CCCGACCAGC GCATCCAGCT AGCCTTCAGC CATTTTGACG CCAAGCAGGA CACGCGCTGG
GCGTCGGATC CGAGCGTGGC CAAACTGCCG CCGGGCAGCG TGCCCGCGCG CGCGCTCGAC
GGGCTGCAAC TTGCCGACCA GAACCAGATC CGCAACACGC TCGTCAATCT CGAATACGAA
CACCGCGACC TGCTCGGCAG CCAGTTGTCG GCGCAGTTCT ACTACCGGAA CTACTACAGC
CGCTTCACGC CGTTCGACGC CCGCGCCGTG CCCGTGCGCG GCGGCAACGT CGACCAGGCG
ATGCAGGATT CCGAGGTCTT CGGCAGCCGC CTGACCGTCA AGACGCCGCT CGGCGCGGAC
AAGCGCACCC GCGTGATCTG GGGCATGGAC TTCGAGCAGG AGACCAGCGA CATGCCGATC
GACATCTTCG ACCTGAAGGC CTATGACGCC AGCGGCGGCC GGATCTTCAA CAAGATTGGC
ACGCTGACCT ACATGCCGCC GATCACCACG CGCAGCATCG GCGGCTTTGC CCAGTTGCAG
CACAAGTTCA ACGAGCAGTG GTCGACCGAG GGCGGCCTGC GCTACCAGTA CGCGCGGGCG
AGCTTCAGCG ACTTCGTGCC GCTTTCGCAA TCGCGCGTGA CCAATCCCGC CACCGTCAGC
GGCGGCGCGG TCGACTACAG TGCCGTGCTC GGCAATATCG GCGTGGCCTA CAAGCCGGTG
AAAGACCACG AGTTCTATGC CGCGTTCAGC CAGGGTTTCA ACCTGCCCGA TATCGGCCTG
CAGGTGCGCA ATGCGCGCGC GGGTTTCGAT ATCGGCTCGT CCGACCTGCA GCCGGTCAAG
ACCAACAACT ACGAACTGGG CTGGCGTGGC GCGTTCGGCA ACACGCTCGG CTCGCTGGCG
ATCTTCTACA CCACGTCGGA CCTCGGCGAC GTGCAGAGCT TCAACAACGG TCTGATCCTG
ACGCGCACCG CGGAAAAGAT CTATGGCGTG GAAGCATCGG CCGACTATCT GTCCACCGAC
GAACGCTGGG GCGCGGGTGG CACCTTCACC TGGATGCAAG GCCGCGAAAC CCCGCAAGGC
CGTGATAGCC AACAGATGAC CGGCTACCGC ATCCCGCCGC TCAAGCTGAC CGGCTACGTG
CAATACCGTC CCGTGCCGCA ATGGAACAAC CGGCTTCAAG CCACATTCTT CGCTGGGTAC
GACTACCGAC TGAACGGCGT GACGAGCTTC GGCCGCCGCG ACGTGAGCAG CTACACCACG
CTCGATCTGA TCAGCAGCTA TCAGGTCACG AAGAAGGACA CGGTCACCGT TGGCATCCAG
AACCTGTTGA ACCGCTACTA CTACCCGCTC TACAGCCAAC TTCTGCGCAA CAGCAACAAC
ACAAGCCATC TCCCGGCGGC CGGCATCACG CTCACCGCCA CCTACCAGCA CCGCTGGTAA
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| Protein sequence | MTHSYSTTGN RVGAAARDYG RRGSMAALAA AVLMSVAVAP VAAQTPRGDV PIHIEAQPLA
DALLQLGRQT SLQLYFPPEL VAGKRAPAVN GTMRPEAALD SLLKGSGIQY QRSGNQGFVL
RPVSAAPAAA PPVPSDTLHA TAQPTTVLAP VEVTASRTSS DLVRPTRQST VLERTELEEL
KTGSDSLATV LSKVIPGMAD SSHTVTDFGQ TLRGRGMLVL LDGIPLNTNR DSARNLANID
PALVERVEVL RGSSAIYGGG ATGGIVSITT RPAGGEPKAD TTVTMSTPLS RLRADGLSAN
VQQHFSGSSG MLDYAFDLGA RHIGNSYDAK GQRIAPEPSQ GDLFDSNNYN VGGKLGLRFA
PDQRIQLAFS HFDAKQDTRW ASDPSVAKLP PGSVPARALD GLQLADQNQI RNTLVNLEYE
HRDLLGSQLS AQFYYRNYYS RFTPFDARAV PVRGGNVDQA MQDSEVFGSR LTVKTPLGAD
KRTRVIWGMD FEQETSDMPI DIFDLKAYDA SGGRIFNKIG TLTYMPPITT RSIGGFAQLQ
HKFNEQWSTE GGLRYQYARA SFSDFVPLSQ SRVTNPATVS GGAVDYSAVL GNIGVAYKPV
KDHEFYAAFS QGFNLPDIGL QVRNARAGFD IGSSDLQPVK TNNYELGWRG AFGNTLGSLA
IFYTTSDLGD VQSFNNGLIL TRTAEKIYGV EASADYLSTD ERWGAGGTFT WMQGRETPQG
RDSQQMTGYR IPPLKLTGYV QYRPVPQWNN RLQATFFAGY DYRLNGVTSF GRRDVSSYTT
LDLISSYQVT KKDTVTVGIQ NLLNRYYYPL YSQLLRNSNN TSHLPAAGIT LTATYQHRW
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