Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1117 |
Symbol | |
ID | 4037915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1218641 |
End bp | 1219666 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976499 |
Product | pyridoxal-5'-phosphate-dependent enzyme, subunit beta |
Protein accession | YP_583272 |
Protein GI | 94310062 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000129584 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.764642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTGCA ACAGCATCAT CGAGAGTATC GGCAACACGC CATTGGTCCA GCTACGCCGG CTCTTCGGCC GCGCGGACGC GGAGGTCTTC GCCAAACTGG AACTGCTCAA TCCGGCCGGC AGCGTCAAGG ACCGGCCCGC GCGCTACATC GTGGAGAAAG GCCTGACCGA AGGAGCGATC GGGCCGCACT CCCATGTCAT CGAAAGCTCG TCGGGCAACC TCGCCATCGC CCTGGCGATG ATCTGCGGCC TCAAGGGGCT GCGCTTCACG GCGGTGGTCG ATCCCAAGAT CTCGCCCACC AACCTGAAGA TCCTGCGTTG CTACGGCGCG GGCATCGAGC AGGTGACCGC GAAGGACAGC CAGGGCGGAT ACCTGGAAAC GCGTATCGAG CGGGTGCGTC AGATGTTGCG CGAACAGCGC GATGCGATCT GGATCAACCA GTACGCCAAT CCGCTCAACT GGGAAAGCCA CTACTACGGC GAGGCCGCCG AGATATTGGC GCAGCTTGCC CAGCCGGCAG ATGTGCTGGT GCTCGGCGTC AGCACGTCCG GCACCGTGCA TGGTATTGCG CGACGGCTGC GCAAGGCATG GCCGTCGATG CGCGTGGTAG GCGTCGACGC AGTCGGTTCC GTGCTGTTCG GCCAACCGTC GCAAGCGCGC GAGCTGCCGG GCATTGGCGC CAGCCGCGTG CCGGAATTGC TGTGCCGGGA CGAGATCGAC GAAGTGATCC ATATCGACGA CTACACCGCC GCCACGGCGT GCCGGCGCCT GCTGGCGCGC GAAGGCATCT TCGCGGGCGG ATCTTCCGGC GCGGTCGTCG CTGCCATCGA GCAGGTCCTA CACGCCACGC CGGTCAGCCA TCGACCGCTG CGCATTCTCA CCCTGTTCCC AGATCGCGGC GAACGCTATC TGGACACCGT TTATGACGAC GCCTGGCTCG CACGCATCGC CGCGCGTCGC GCCGTGCCGA ACCTCGCCGC TCTTCCTACC GTTGCCTCAT TGATCCCCGC CGGAGTGTCC GCATGA
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Protein sequence | MVCNSIIESI GNTPLVQLRR LFGRADAEVF AKLELLNPAG SVKDRPARYI VEKGLTEGAI GPHSHVIESS SGNLAIALAM ICGLKGLRFT AVVDPKISPT NLKILRCYGA GIEQVTAKDS QGGYLETRIE RVRQMLREQR DAIWINQYAN PLNWESHYYG EAAEILAQLA QPADVLVLGV STSGTVHGIA RRLRKAWPSM RVVGVDAVGS VLFGQPSQAR ELPGIGASRV PELLCRDEID EVIHIDDYTA ATACRRLLAR EGIFAGGSSG AVVAAIEQVL HATPVSHRPL RILTLFPDRG ERYLDTVYDD AWLARIAARR AVPNLAALPT VASLIPAGVS A
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