| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1108 |
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| Symbol | |
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| ID | 4037906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1206098 |
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| End bp | 1208383 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976490 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_583263 |
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| Protein GI | 94310053 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.441045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTGCC CCTACGGCTT TTGGATCGGG CCGTGGTGCA AGGGGGTTAT TTCCTTTTGG
AGTCTTATCT TGTCTTTTGC TGTAGAGCGT AGTGTTCAAC CGCGTGCCTT GCGGCCATCC
CCGATTTACC TGCGCCATCT GGTTGTGGCG CTGGCGGCAG CCGGCGTACT GCCGTCCGTG
GCGCTGGCAC AGGAAGATGC GCACCCCTCC CAATCGTCGG GTGTGCCGCA AGCCGCGGCG
ACGTTGCCCA CCGTGACCGT GCACGGCGAC GCAACTCCCG ATCAATTGCC GCCGCCCTAT
GCGGGCGGGC AGGTCGCGCG CGGTAGCCGG CTTGGCGTGC TTGGCAATCA GGACTTCATG
GATGTGCCGT TCAGCATGAC GACGTACACG TCGCAGGCCA TCCAGAATCA GCAGGCACGA
AGTATTGCCG GCGTGCTGGC TGACGATCCG TTCATCCGCA CCAGCTACGG CTTCGGCAAC
TTCTCCGAGA CGTACATGGT GCGCGGTTTC CAGCTGACAG GCGACGACCT GGGCTGGAAC
GGCTTGTTCG GCATCGCGCC GCGTCAGCTC GTGGCGGCGG AAGCGGTCGA TCGGGTGGAA
ACGTTCCGGG GCGCCAGCGC GTTCCTCAAC GGCGTATCGC CAACCGGTAC CGGCATTGGC
GGGGGTATCA ACCTCGTCCC GAAGTACGCC ACGGTGGCGC CGATCACGCA GGCAACGATC
GACTACACCA GTGATGCCCA AGTGGGTGGC GCAGTCGATG TCGGCCGCCG CTTTGGCAGC
GCCAAGGAGT TTGGGGCGCG GATCAACGCG ATGGCGCGTG GGGGCGATAC CCCGGTCGAC
GCCGAGAGCC GCCAGCAGCG CCTGCTGACG CTCGGACTCG ATTACCAGGG CGAGGCGTTT
CGCGTCAATG CCGATTTTGG CTATCAGAAG CAGACGGTGA ATCAGGGAAG AAGCACAATC
CAGCTGGCTT CGGGAACGAC GGCCCTGCCG CCCGTGCCGT CGGCGAGTTC GAATTTCGCG
CAACCCTGGA CGAACTCGAT GCTCGAGGAT ACGTGGGGGA CGATTCGCGC CGAGTACGAC
TTTGCGAAGG ACTGGACGGC GTATGCGGCC TTCGGCATGC ATCACAGCAA CGAGATTGGC
AACTACGGCG GTGCCACCGT CGGCAACGAC GGTTTCGGCA CCTCGCAGCG GCTCAGCGTG
CCGTTCAAGC AGGACACAAC CACCGGAGAG GTCGGGATTC GGGGTCGCTT CGTGACGGGT
CCCGTCAAGC ACAGCGTGAA TCTGGGGTGG TCGGGATTGG AGCAGGAAAA ACGATCGGCC
TACGAGATGT CCCGCACGTA CGCGACCAAC CTTTACGATG CCCCTGTCGT TGCGCGTCCA
GCCACGGCAT ATTCGGGCAG CAGCATGACC GATCCACAGG TGACGGGCCG TACGAACCTG
AACGGCGTGT CGGTGGCTGA CACGATGTCG TTGCTGGACG ACCGCGTGCT GCTTACAGCA
GGCGTCAGGC ATCAAGTAAT CAACACGCGT GGTTACGCCT ACAACACCAA CGCGGTCACC
CCATATGGCG ACTCGGCAAC GTCGCCCATG TTCGGCATCG TGATCAAGCC GCTCCAGAAC
CTGTCGGTGT ACTACAACCA CATCGAGGGA CTGGCCGCCG GGCCGACGCC GCCGTCGAGC
GCGACAAACC GAAACGACGT ATTCCCGCCG ATCAAGTCGA AGCAGGATGA GGCCGGCGTC
AAATACGATG CGGGCAAGTA CGGCACAACG CTTGCGTTCT TCCAGATCAA GCAGCCCAAC
GGCATTACGC AAGGGAACAT ATTCTCGGTG GCCGGCGAGC AGCGCAACCG TGGCGTCGAG
TGGAGCGTGT TTGGCGAGCC GGTGCGCGGG CTCCGGCTGC TGGGCGGCGT TGGCTATATC
GATACGAAGA TGTCGAACAC CGGCAATGCC GCGACCGAGG GCAAGGAAGC GATCGGCGTG
CCGAACTACA CGCTGACGGC GAGTGCCGAA TACGACCTGC CTTTCGTGCC GGGGCTGACC
GTCTCGGGTC GATACATCCA GACCGGCAGC CAGCAAGCCA ATGCGACCAA CACGATCAGC
CTGCCGTCCT GGAACCGTTT CGATCTGGGC GCGCGATACA TGTTCAAGGC CGCGCAGATG
CGCTACACGA TGCGTGCGTC GGTGGAAAAC CTTGCGGACA AGGATTACTG GGCCTCGTCG
TATGGCGGCT ATCTGGTGGT TGGCCAACCT CGCACGTTCA AGCTGTCCAT GACCGTGGAC
TACTAA
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| Protein sequence | MPCPYGFWIG PWCKGVISFW SLILSFAVER SVQPRALRPS PIYLRHLVVA LAAAGVLPSV
ALAQEDAHPS QSSGVPQAAA TLPTVTVHGD ATPDQLPPPY AGGQVARGSR LGVLGNQDFM
DVPFSMTTYT SQAIQNQQAR SIAGVLADDP FIRTSYGFGN FSETYMVRGF QLTGDDLGWN
GLFGIAPRQL VAAEAVDRVE TFRGASAFLN GVSPTGTGIG GGINLVPKYA TVAPITQATI
DYTSDAQVGG AVDVGRRFGS AKEFGARINA MARGGDTPVD AESRQQRLLT LGLDYQGEAF
RVNADFGYQK QTVNQGRSTI QLASGTTALP PVPSASSNFA QPWTNSMLED TWGTIRAEYD
FAKDWTAYAA FGMHHSNEIG NYGGATVGND GFGTSQRLSV PFKQDTTTGE VGIRGRFVTG
PVKHSVNLGW SGLEQEKRSA YEMSRTYATN LYDAPVVARP ATAYSGSSMT DPQVTGRTNL
NGVSVADTMS LLDDRVLLTA GVRHQVINTR GYAYNTNAVT PYGDSATSPM FGIVIKPLQN
LSVYYNHIEG LAAGPTPPSS ATNRNDVFPP IKSKQDEAGV KYDAGKYGTT LAFFQIKQPN
GITQGNIFSV AGEQRNRGVE WSVFGEPVRG LRLLGGVGYI DTKMSNTGNA ATEGKEAIGV
PNYTLTASAE YDLPFVPGLT VSGRYIQTGS QQANATNTIS LPSWNRFDLG ARYMFKAAQM
RYTMRASVEN LADKDYWASS YGGYLVVGQP RTFKLSMTVD Y
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