Gene Rmet_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1070 
Symbol 
ID4037867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1162640 
End bp1163428 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID637976451 
Productbeta-lactamase-like protein 
Protein accessionYP_583225 
Protein GI94310015 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.941364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCT TTGCTTTTTT GGGCAGCGGC AGCGAGGGCA ACTCGCTGCT GATCGAGGCG 
AGCGATGGTG CGAGCGTGAC GCGCGTCCTG CTGGATTGCG GTTTCGGCAT CAAGGAGACC
GCTCGCCGGC TGGAGCGGCT CGGCGTCGCG CCGGAGCAAC TCGACGCGGT GCTGGTCACG
CACGAGCATG GCGACCATGT CGGCTCGGCC TATGCGTTTG CGGCGCGCTA CAAGCTACCG
GTCCACACGA GCCACGGCAC GTGGCTGGCG ACGTCACATA TGCGAGGCGC GGATGTGGCG
GATGTGCGCG TGTGCTGCGC CGATCATTCA TTCTCGGTCG GTGGCTTGCA GATCCATCCC
TATACGGTGC CGCATGATGC GCGTGAGCCA TTGCAGTTCG TGCTGACTGA TGGCGATGCA
CGGCTCGGTG TACTGACCGA TGCAGGGATG GAGACGCCGT ATGTGACCGC GCGGCTGGCG
GGTGTGCATT CACTGGTGCT CGAATGCAAT CACGATCGGG AGATGCTGCG TAACTCGGTC
TATCCGTATT CGCTCAAACG GCGCATCGGA GGTGATTTTG GGCATCTGGC AAATGACATT
GCCGCGAGTA TTCTGTCTCA GGTCATGCAT GGGCAGATGT CGCGCGTGGT TGCAGCGCAT
CTGAGCAAGC AGAACAATAC GTGCGAACTG GCGGCAGGCG CACTGGCCTC GGTGCTTGGC
ACATCGCCGG GGGATATCCT GATCGCGGAT CAGGAAGAGG GATTGGGCTG GCAGGCGGTG
CGCCCATAA
 
Protein sequence
MMRFAFLGSG SEGNSLLIEA SDGASVTRVL LDCGFGIKET ARRLERLGVA PEQLDAVLVT 
HEHGDHVGSA YAFAARYKLP VHTSHGTWLA TSHMRGADVA DVRVCCADHS FSVGGLQIHP
YTVPHDAREP LQFVLTDGDA RLGVLTDAGM ETPYVTARLA GVHSLVLECN HDREMLRNSV
YPYSLKRRIG GDFGHLANDI AASILSQVMH GQMSRVVAAH LSKQNNTCEL AAGALASVLG
TSPGDILIAD QEEGLGWQAV RP