Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1025 |
Symbol | |
ID | 4037822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1115331 |
End bp | 1116551 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976406 |
Product | cysteine desulfurase |
Protein accession | YP_583180 |
Protein GI | 94309970 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00998384 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.30784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCCCACATTT CCCGATCTAC ATGGATTACT CGGCAACGAC GCCGGTGGAC CCGCGCGTGG CCGACAAGAT GATTCCGTAC CTGCGCGAGC AGTTCGGTAA TCCGGCGTCG CGTAGCCACG CGTATGGCTG GGACGCCGAG CGCGCCGTGG AAGAGGCGCG CGAGCAGGTG GCCGCGCTGG TCGACGCCGA TCCGCGCGAA ATCGTCTGGA CGTCGGGCGC GACCGAGTCG GACAACCTCG CCATCAAGGG CGCGGCGAAT TTCTACTCGG GCAAGGGCAA GCACATCATC ACCGTGAAGA CCGAGCACAA GGCCGTGCTC GATACCACGC GCGAACTGGA GCGTCAGGGC TTCGAGGTGA CGTACCTCGA CGTCAAGGAT GACGGCCTGA TCGACATGGA TGTGTTCAAG CAGGCGATTC GCCCGGACAC GATCCTGGTG TCGGTGATGC TCGTGAACAA TGAGATTGGT GTGATCCAGG ACGTCGAGCA GATCGGTGAG ATCTGCCGCG AGAAGGGCAT CATCTTCCAT TGCGACGCCG CGCAGGCGAC CGGCAAGGTG ACCATCGACC TGAGCACGCT GAAGTGCGAC CTGATGTCGT TCTCGGCCCA CAAGACCTAT GGTCCGAAGG GCATCGGCGC GCTGTATGTT CGCCGCAAGC CGCGCGTGCG CATCGAAGCG CAAATGCACG GCGGCGGTCA CGAGCGTGGC ATGCGTTCGG GCACGCTGGC CCCGCACCAG ATCGTCGGCA TGGGCGAGGC ATTCCGTCTG GCCCGCGAGG AAATGGCCAC GGAAAACGAA CGTATCCGGA TGCTGCGCGA CCGCCTGTGG AATGGTCTGT CGAGCATGGA AGAGGTGTAT CTGAACGGTT CGATGGAACA CCGCGTGCCG CACAACCTCA ACGTCAGCTT CAACTTCGTC GAGGGTGAGT CGCTGATCAT GGCGATCAAG GATGTGGCCG TGTCGTCGGG TTCGGCCTGC ACGTCGGCTT CGCTGGAGCC GTCGTACGTG CTGCGCGCCC TTGGGCGCAA TGACGAACTG GCGCACAGCT CGATCCGTTT CACCGTGGGC CGCTTCACGA CCGAAGCCGA AATCGACTAC ACCGTCGAAC TGCTCAAGAA CAAGATCGGC AAGCTGCGCG ACCTGTCGCC GCTGTGGGAA ATGTTCAAGG ACGGCGTCGA CCTGAATTCG ATCCAGTGGG CCGCGCACTG A
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Protein sequence | MSTTPHFPIY MDYSATTPVD PRVADKMIPY LREQFGNPAS RSHAYGWDAE RAVEEAREQV AALVDADPRE IVWTSGATES DNLAIKGAAN FYSGKGKHII TVKTEHKAVL DTTRELERQG FEVTYLDVKD DGLIDMDVFK QAIRPDTILV SVMLVNNEIG VIQDVEQIGE ICREKGIIFH CDAAQATGKV TIDLSTLKCD LMSFSAHKTY GPKGIGALYV RRKPRVRIEA QMHGGGHERG MRSGTLAPHQ IVGMGEAFRL AREEMATENE RIRMLRDRLW NGLSSMEEVY LNGSMEHRVP HNLNVSFNFV EGESLIMAIK DVAVSSGSAC TSASLEPSYV LRALGRNDEL AHSSIRFTVG RFTTEAEIDY TVELLKNKIG KLRDLSPLWE MFKDGVDLNS IQWAAH
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