Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1017 |
Symbol | |
ID | 4037814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1106373 |
End bp | 1107617 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637976398 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_583172 |
Protein GI | 94309962 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0679448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.514648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTATC AACTGCATGA ATTCCAGCGC ACGATGCTGA ACCCGCTTAC CGCGTGGGCC CAAGCGACTG CAAAGACATT TACGAACCCC CTCAGCCCCC TTTCACTGGT CCCCGGCGCC CCTCGGCTGG CAGCAGGCTA CGAACTGCTG TACCGATTGG GAAAAGCCTA CGAAAAGCCG GAATTCAACA TCAAATCCGT CCGTTCGAAT GGCCGCGACA TTCCGATCGT CGAACAAACC ATCCTGGACA AGCCGTTCTG CAAGCTGGTG CGCTTCAAGC GCTATGCGGA CGATCCGGAC ACCATCAAGC TGCTCAAGGA CGAGCCGGTC GTGCTGGTCT GCGCGCCGCT GTCCGGTCAC CACTCCACGC TGCTGCGCGA TACCGTGCGT ACTTTGCTGC AGGACCACAA AGTCTATGTG ACCGACTGGG TGGACGCCCG CATGGTGCCG GTGGAGCATG GTGAGTTCCA TCTGTCCGAC TACATCCGTT ACATCCAGGA GTTCATCCGT CACATTGGCG CGGAGAACCT GAATGTGATC TCCGTGTGCC AGCCGACTGT GCCGGTGCTC GCCGCGATCT CGCTGATGGC GTCGGCAGGT GAGAAGACCC CGCGCACCAT GACGATGATG GGTGGCCCGA TCGATGCGCG AAAGAGCGCA ACGGCGGTCA ACTCGCTCGC CACCAACAAG TCCTACGAGT GGTTCGAGAA CAACGTCATC TACACGGTGC CGGCCAACTA CCCGGGCCAC GGCCGCCGCG TCTATCCAGG CTTCCTGCAG CACGCTGGCT TCGTGGCGAT GAACCCGGAC CGCCATGTGT CATCGCACTA TGACTACTAC CTGAGCCTGG TCCAGGGCGG GTCCGACGAC GCCGAGGCGC ACGTCAAGTT CTATGACGAG TACAACGCCG TGCTCGACAT GGCGGCCGAG TACTACCTTG AGACGATTCG CACGGTGTTC CAGGAATTCC GCCTGGCCAA TGGCACGTGG GTCGTCGACG GCGAGCCCGT GCGTCCGCAG GACATCAAGA GCACTGCCCT GCTGACGATC GAAGGCGAGC TCGACGATAT TTCGGGCGCC GGCCAGACCG CTGCCGCGCA CGACTTGTGC ACCGGTATCG CGAAAACCCG CAAGCAACAC CTGACCGCCG AGAAATGCGG CCACTACGGG ATTTTCTCGG GCCGCCGCTG GCGCGATAGC GTCTATCCGG AACTGCGCGA TTTCATCCGC AAGTACCGCG CCTGA
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Protein sequence | MLYQLHEFQR TMLNPLTAWA QATAKTFTNP LSPLSLVPGA PRLAAGYELL YRLGKAYEKP EFNIKSVRSN GRDIPIVEQT ILDKPFCKLV RFKRYADDPD TIKLLKDEPV VLVCAPLSGH HSTLLRDTVR TLLQDHKVYV TDWVDARMVP VEHGEFHLSD YIRYIQEFIR HIGAENLNVI SVCQPTVPVL AAISLMASAG EKTPRTMTMM GGPIDARKSA TAVNSLATNK SYEWFENNVI YTVPANYPGH GRRVYPGFLQ HAGFVAMNPD RHVSSHYDYY LSLVQGGSDD AEAHVKFYDE YNAVLDMAAE YYLETIRTVF QEFRLANGTW VVDGEPVRPQ DIKSTALLTI EGELDDISGA GQTAAAHDLC TGIAKTRKQH LTAEKCGHYG IFSGRRWRDS VYPELRDFIR KYRA
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