Gene Rmet_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1004 
Symbol 
ID4037801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1095267 
End bp1095809 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID637976385 
Productheat shock protein GrpE 
Protein accessionYP_583159 
Protein GI94309949 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.324391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC AGAACCAGAC GCCAACCCCC AATACGCAGG CAGCCGAGGA CGCCGCCCGC 
ACGCCGGAAG CCGGTGCCGA CGAGGTGGGC CGCCTGACGC AACAGGTGGC CGAACTGGAA
GCCAAGGCGA AGGAACACTA CGACATGTTC CTGCGCGCCA CGGCGGAGGG CGAGAACATC
CGCCGCCGTT CGCAGGACGA AGTGGCCAAG GCCCACAAGT TCGCCATCGA GAGCTTTGCC
GATAACCTCG TGCCCGTGAT GGACAGCCTG CAGGCCGCGC TGGCCGACGG TACCGGTGAC
CTCGGCAAGC TGCGCGAAGG TGTGGAACTG ACCGCACGCC AGCTGGCCGC CGCGTTCGAA
CGTGGTCGCA TCGTCGAAGT GAACCCGGTG GGCGAGAAGT TCGATCCGCA TCGCCACCAG
GCCATCTCGA TGGTGCCGTC CGAGCAGGAA CCGAACACCG TGGTCAACGT GCTGCAACGC
GGCTACATGA TTGCCGACCG CGTGCTGCGC CCGGCGCTGG TGACCGTCTC GGCGCCGCGC
TGA
 
Protein sequence
MEEQNQTPTP NTQAAEDAAR TPEAGADEVG RLTQQVAELE AKAKEHYDMF LRATAEGENI 
RRRSQDEVAK AHKFAIESFA DNLVPVMDSL QAALADGTGD LGKLREGVEL TARQLAAAFE
RGRIVEVNPV GEKFDPHRHQ AISMVPSEQE PNTVVNVLQR GYMIADRVLR PALVTVSAPR