Gene Rmet_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1002 
Symbol 
ID4037799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1094380 
End bp1094775 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content68% 
IMG OID637976383 
ProductRNA-binding S4 
Protein accessionYP_583157 
Protein GI94309947 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.320344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCG ATTTCGAACC CGATGCGCGG CTGCGCATCG ACAAATGGCT CTGGTGCGCG 
CGCTTCTTCA AGACGCGCTC GCTGGCTGCC GAGGCGGTGG AGCGGGGCCG CGTGAGCGTC
AACGGGCAGC CCTGCAAGAA CTCGCGCGAG GTCAAGCCGG GCGACACCGT GATATTGGAG
GCGCATCAAC AGCAATGGGA GGTGGTGGTC AAGGGCGTGG CCGCGTCACG CGGGCCGGCG
CCGATCGCCC AGACGCTCTA TGCGGAGACC GAGGAAAGCC AGGCCAGGCG CCAGACAGAC
GCGGAACGGC GGCGCTTCCA GCACGAGCCG GCCGCGCAGA TGCACGGGCG ACCGACCAAG
CGCGACCGGC GCAGAATCGA CGGCTTCAAG GGGTGA
 
Protein sequence
MQVDFEPDAR LRIDKWLWCA RFFKTRSLAA EAVERGRVSV NGQPCKNSRE VKPGDTVILE 
AHQQQWEVVV KGVAASRGPA PIAQTLYAET EESQARRQTD AERRRFQHEP AAQMHGRPTK
RDRRRIDGFK G