Gene Rmet_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0990 
Symbol 
ID4037787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1075377 
End bp1076432 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content64% 
IMG OID637976371 
Productmethyltransferase type 12 
Protein accessionYP_583145 
Protein GI94309935 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.165588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCG ATGAAGCAAG GCTGAATGCC TTCATGGAGA AATTCGTCCA TGACATCGGT 
GCCGTGATGC ACGCGGCGAC AGTGGTGTTG GGCGACGAGC TTGGGTTGTA CAAGGCGCTG
GCCGAAAAAC CGATGACCGC CGACATGCTG GCGGCAAAAA CCCGCACGGA TGCGCGCTAC
CTGCGCGAGT GGCTGTCAGC GCAGGCCGCC AGCGGCTACG TCGAATACGA CGCGGACACC
GACAGTTTCT CGTTGAACGA GGAACAGGCG CTGGCGCTGG CGCAGGAGGG CAGCCCCGCG
TTCATTCCCG GCGCATTCCA GATTGCGGTG GCGCAGTTCC GCGCGATTCC GAAGATGGTC
GACATCTTCC ATAACGGCAG AGGGCTTGGC TGGCACGAAC ACGACCCGGC GCTGTTCCAT
GGTACCGAGC GGTTCTTCCG CCCCGGCTAC GCGGCACATC TGGTCGGCGA ATGGATTCCG
TCGCTGGAAG GCATCGACGC CCGGCTCAAG GCGGGGGGCA TGGTGGCTGA CGTGGGGTGC
GGGCATGGTG CCTCGACGAT CATCATGGCG CAGGCCTATC CGGCTTCCAC GTTTCGCGGC
TTCGACTACC ACGAGCCGTC GATCCGGTAC GCGACCGAGT CTGCCAGACG TGCTGGCGTG
AGCAACCGCG TGACGTTCGA AGTGGCGGCG GCCAAGGATT ATCCCGGTAG CGGATATGAC
CTCGCGACGG TCTTCGACTG CCTGCATGAC ATGGGCGACC CGGTTGGCGC CGCGCGGCAC
ATCCGCGAAT CGCTGAAGCC CGACGGGTGC TGGATGATTG TGGAGCCGTT TGCCAATGAC
CGGCTGCAGG ACAACCTCAA TCCGATCGGG CGCGTGTTCT ATTCGGCGTC GACATTCATT
TGCACGCCGG GATCGCGGTC GCAGGAGGGG GCAATGTGCC TGGGAGCGCA GGCCGGTGAG
GCCCGCATGC GTGGCGTGAC GGAGCAGGGC GGCTTCGGCA GCTTCCGCCG CACGGCGCAG
ACGCCGTTCA ATCTGGTGTA TGAGGTGAGG CCGTAG
 
Protein sequence
MPVDEARLNA FMEKFVHDIG AVMHAATVVL GDELGLYKAL AEKPMTADML AAKTRTDARY 
LREWLSAQAA SGYVEYDADT DSFSLNEEQA LALAQEGSPA FIPGAFQIAV AQFRAIPKMV
DIFHNGRGLG WHEHDPALFH GTERFFRPGY AAHLVGEWIP SLEGIDARLK AGGMVADVGC
GHGASTIIMA QAYPASTFRG FDYHEPSIRY ATESARRAGV SNRVTFEVAA AKDYPGSGYD
LATVFDCLHD MGDPVGAARH IRESLKPDGC WMIVEPFAND RLQDNLNPIG RVFYSASTFI
CTPGSRSQEG AMCLGAQAGE ARMRGVTEQG GFGSFRRTAQ TPFNLVYEVR P