Gene Rmet_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0949 
Symbol 
ID4037746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1034328 
End bp1036301 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content62% 
IMG OID637976330 
Productcytochrome c oxidase subunit I 
Protein accessionYP_583104 
Protein GI94309894 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02843] cytochrome o ubiquinol oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.979391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.982005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCA AATTGAGTTT GTCGGCGATT CCGTTTCATG AGCCGATCAT CATGATCACG 
CTGAGCTGCG TGGCCCTTGG CGGGCTGGCG CTGCTCGGTG CGATCACGTA CTTCAAGAAG
TGGGACTACC TGTGGACCGA GTGGATTACC TCGGTCGATC ACAAGCGCAT TGGCGTGATG
TATTCGCTGG TGGCGCTGAT CATGCTGCTG CGCGGCTTTG CCGACGCCGT CATGATGCGT
ACCCAGCTGG CGGTTGCCAC CAACGGCTCC ACCGGCTTCC TGCCGCCCGA GCACTATGAC
CAGGTGTTCA CGGCCCACGG CGTGATCATG ATCTTCTTCG TGGCCATGCC GCTGATGACG
GGTCTGATGA ACCTCGTGGT GCCCCTGCAG ATCGGCGCGC GCGACGTGGC GTTCCCGTTC
CTGAACACGC TGAGCTTCTG GCTGTTCGTG GCCGGCGCGA TGCTCGTGAA CGTCTCGCTG
GGCGTTGGCG AATTCGCGCG TACCGGCTGG CTGGCCTATC CGCCGCTGTC GGGTCTGGAC
TACAGCCCGG GCGTGGGGGT GGACTACTAC CTTTGGTCGC TGCAGATATC AGGGTTGGGG
ACATTGCTGA CCGGCGTGAA CTTCCTGGTG ACCATCCTGA AGATGCGCGC CCCGGGCATG
ACGCTGATGC GCATGCCGGT GTTCACCTGG ACGGTCCTGT GCACCAACGT GCTGATCGTG
GCTGCCTTCC CGGTGCTGAC GGTGTCGCTG GCACTGCTGG GCCTGGACCG CTACTTCGAC
ATGCACTTCT TCACGAACAA TGGCGGCGGT AACGCCATGA TGTACGTGAA CCTGATCTGG
ATCTGGGGCC ACCCCGAGGT CTACATCCTG ATCCTGCCGG CGTTCGGTAT CTTCTCGGAA
ATCATCTCTA CGTTCTCGGG CAAGAAGCTG TTCGGCTACA AGGGGATGGT GTATGCCACC
AGCGCGATCA TGGTGCTGTC GTTCATCGTG TGGCTGCACC ACTTCTTCAC GATGGGCTCT
GGCGCCAACG TGAACGCGTT CTTCGGCATC ACGACGATGA TCATCTCGAT CCCGACGGGC
GTGAAGATCT TCAACTGGCT GTTCACGATG TACCGTGGCC GCGTGCAATT CACGTCGCCG
GTGCTGTGGA CGCTGGGCTT CATGATCACG TTCGTGATCG GTGGCATGAC CGGCGTGCTG
ATGGCCGTGC CGGCTGCTGA CTTCGTGCTG CACAACAGCC TGTTCCTGAT TGCTCACTTC
CACAACGTGA TCATCGGCGG CGTGCTGTTT GGCTACCTGG CCGGCGTGAC CTACTGGTGG
CCGAAGGCCT TCGGCTTCAA GCTGAACGAG CGTCTGGGCA AGTGCGCCTT CTGGTGCTGG
CTGGTGGGCT TCTACTTCGC CTTCATGCCG CTGTACGTGC TGGGCCTGAT GGGCATGACC
CGTCGTCTGA ACCACACCGA CAACCCGGCC TGGACGCCGT GGCTGCATCT GGCCGTGGTG
GGCGTGGTGT TCGTGGCGCT GGGCATCTTC TTCCAGGTGC TGCAGATCGT CGTGTCGATC
CGCGACCGCA AGAAGCTGGC AGACGTGACG GGCGACCCGT GGGGTGGCCG CACGCTGGAA
TGGGCAACCT CGTCGCCGCC GGCGTTCTAC AACTTCGCGC ACACCCCGGT GGTGCGTGAC
CTGGACGCGT TTGCCGACAT GAAGGCACGT GGCGAGACGA TCCGCACGGA TGGCTTCGAG
CAGATTCACA TGCCGAAGAA CACCGCGGCT GGTTTCTACA TGGGTGCATT CAGCCTGGTG
CTGGGCTTCG CGCTGACGTG GCACATCTGG TGGCTTGCCG CCGTGGGCCT GATCGGCATG
GTCGTGGCGT TTATCCGCCG CGCCAACGAT GACCACATCG ATTACTACGT GCCGGCCTCC
GAGGTCGAGC AGATCGAAAC GCGCTACCAG CAGCGCATTG CTGCCCAGGG CTGA
 
Protein sequence
MFGKLSLSAI PFHEPIIMIT LSCVALGGLA LLGAITYFKK WDYLWTEWIT SVDHKRIGVM 
YSLVALIMLL RGFADAVMMR TQLAVATNGS TGFLPPEHYD QVFTAHGVIM IFFVAMPLMT
GLMNLVVPLQ IGARDVAFPF LNTLSFWLFV AGAMLVNVSL GVGEFARTGW LAYPPLSGLD
YSPGVGVDYY LWSLQISGLG TLLTGVNFLV TILKMRAPGM TLMRMPVFTW TVLCTNVLIV
AAFPVLTVSL ALLGLDRYFD MHFFTNNGGG NAMMYVNLIW IWGHPEVYIL ILPAFGIFSE
IISTFSGKKL FGYKGMVYAT SAIMVLSFIV WLHHFFTMGS GANVNAFFGI TTMIISIPTG
VKIFNWLFTM YRGRVQFTSP VLWTLGFMIT FVIGGMTGVL MAVPAADFVL HNSLFLIAHF
HNVIIGGVLF GYLAGVTYWW PKAFGFKLNE RLGKCAFWCW LVGFYFAFMP LYVLGLMGMT
RRLNHTDNPA WTPWLHLAVV GVVFVALGIF FQVLQIVVSI RDRKKLADVT GDPWGGRTLE
WATSSPPAFY NFAHTPVVRD LDAFADMKAR GETIRTDGFE QIHMPKNTAA GFYMGAFSLV
LGFALTWHIW WLAAVGLIGM VVAFIRRAND DHIDYYVPAS EVEQIETRYQ QRIAAQG