Gene Rmet_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0939 
Symbol 
ID4037736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1024597 
End bp1026063 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content60% 
IMG OID637976320 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_583094 
Protein GI94309884 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.573933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTGT CTTTCGCAAT CTGGCTGCCT ATCTTCTTCG GGCTGGTGGT ATTGATGTTC 
GGCTCCGACC GAAGCAAATG CTTCGTGCGC TGGATGGCGC TGTTCGGTGC TATCGTCAGC
TTTGCCGTCA CGCTGCCGCT GATCTTCCAC TTCGACACCG CTTCCGCTGC GATGCAGTTC
GTCGAGCAGG CGACGTGGAT CGAACGCTTC AACATCCAGT ACCACCTGGG TGTGGATGGC
ATCTCGATGT GGTTCGTGGT GCTGACCGCA TTCATCACCG TGATCGTCGT GATCTCGGCC
TGGGAAGTGA TCACCGAACG CGTGGCCGAG TACATGGCCT CGTTCCTGAT CCTGTCAGGC
TTGATGGTCG GTGTCTTCTC GTCGCTGGAC GGCCTGCTGT TCTACGTGTT CTTCGAAGCC
ACGCTGATCC CGATGTACAT CATCATCGGT GTCTGGGGCG GCCCGAACCG CGTGTATGCG
GCGTTCAAGT TCTTCCTCTA CACGCTGCTC GGCTCGCTGC TGACCCTGGT CGCGCTGCTG
TACCTGTACA ACAAGACGGG CTCGTTCGAC ATCCTCACCT GGCATCAGGC CAAGTTGACG
ATGAACGAGC AGATCGCGAT CTTCCTCGCG TTCTTCATGG CCTTCGCGGT GAAGGTGCCG
ATGTGGCCGG TGCACACCTG GCTGCCGGAC GCCCACGTGG AAGCGCCGAC CGGCGGTTCC
GTGGTGCTGG CGGCGATCAT GCTGAAGCTG GGCGCCTACG GTTTCCTGCG GTTCTCGCTG
CCGATCGCCC CGGACGCCAG CCACTACCTG GCCCCGTTCA TCATCACGAT CTCGCTGATC
GCCGTGATCT ACATCGGCCT CGTGGCACTG GTCCAGGCCG ACATGAAGAA GCTGGTGGCG
TACTCGTCGA TCGCTCACAT GGGTTTCGTG ACGCTCGGTT TCTTCATCTT CAATGAAATC
GGCATCGAGG GCGGCATCAT CCAGATGATC TCGCATGGTT TCGTGTCGGG CGCGATGTTC
CTGTGTATCG GTGTGCTCTA TGACCGCGTG CACTCGCGCC AGATCGCCGA CTACGGCGGT
GTGGTGAACG TGATGCCGAA GTTCGCGGCG CTGTCGGTGT TCTTCGCGAT GGCCAACTGT
GGCCTGCCGG CTACCTCGGG TTTCGTGGGC GAGTTCATGG TGATCCTGGG TGCTGTCAAG
TTCAACTTCT GGATTGGCCT GCTGGCCGCC ACGGCCCTGA TCTTCGGCGC GGCTTACTCG
CTGTGGATGG TCAAGCGCGT GATCTTCGGC GATATCGTGC ACGAGCACGT GCGTGAACTG
GTGGACCTGA ACAAGCGTGA ATTCTTCATG CTCGGTCTGC TGGCGATCAT GACGCTGTAC
ATGGGTCTGT ACCCGAAACC CTTCACCGAC GTGATGCACG CATCGGTGGT GAACCTGCTG
TCCCACGTGG CACAGTCCAA GCTGTAA
 
Protein sequence
MVLSFAIWLP IFFGLVVLMF GSDRSKCFVR WMALFGAIVS FAVTLPLIFH FDTASAAMQF 
VEQATWIERF NIQYHLGVDG ISMWFVVLTA FITVIVVISA WEVITERVAE YMASFLILSG
LMVGVFSSLD GLLFYVFFEA TLIPMYIIIG VWGGPNRVYA AFKFFLYTLL GSLLTLVALL
YLYNKTGSFD ILTWHQAKLT MNEQIAIFLA FFMAFAVKVP MWPVHTWLPD AHVEAPTGGS
VVLAAIMLKL GAYGFLRFSL PIAPDASHYL APFIITISLI AVIYIGLVAL VQADMKKLVA
YSSIAHMGFV TLGFFIFNEI GIEGGIIQMI SHGFVSGAMF LCIGVLYDRV HSRQIADYGG
VVNVMPKFAA LSVFFAMANC GLPATSGFVG EFMVILGAVK FNFWIGLLAA TALIFGAAYS
LWMVKRVIFG DIVHEHVREL VDLNKREFFM LGLLAIMTLY MGLYPKPFTD VMHASVVNLL
SHVAQSKL