Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0939 |
Symbol | |
ID | 4037736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1024597 |
End bp | 1026063 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637976320 |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_583094 |
Protein GI | 94309884 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.573933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTCTGT CTTTCGCAAT CTGGCTGCCT ATCTTCTTCG GGCTGGTGGT ATTGATGTTC GGCTCCGACC GAAGCAAATG CTTCGTGCGC TGGATGGCGC TGTTCGGTGC TATCGTCAGC TTTGCCGTCA CGCTGCCGCT GATCTTCCAC TTCGACACCG CTTCCGCTGC GATGCAGTTC GTCGAGCAGG CGACGTGGAT CGAACGCTTC AACATCCAGT ACCACCTGGG TGTGGATGGC ATCTCGATGT GGTTCGTGGT GCTGACCGCA TTCATCACCG TGATCGTCGT GATCTCGGCC TGGGAAGTGA TCACCGAACG CGTGGCCGAG TACATGGCCT CGTTCCTGAT CCTGTCAGGC TTGATGGTCG GTGTCTTCTC GTCGCTGGAC GGCCTGCTGT TCTACGTGTT CTTCGAAGCC ACGCTGATCC CGATGTACAT CATCATCGGT GTCTGGGGCG GCCCGAACCG CGTGTATGCG GCGTTCAAGT TCTTCCTCTA CACGCTGCTC GGCTCGCTGC TGACCCTGGT CGCGCTGCTG TACCTGTACA ACAAGACGGG CTCGTTCGAC ATCCTCACCT GGCATCAGGC CAAGTTGACG ATGAACGAGC AGATCGCGAT CTTCCTCGCG TTCTTCATGG CCTTCGCGGT GAAGGTGCCG ATGTGGCCGG TGCACACCTG GCTGCCGGAC GCCCACGTGG AAGCGCCGAC CGGCGGTTCC GTGGTGCTGG CGGCGATCAT GCTGAAGCTG GGCGCCTACG GTTTCCTGCG GTTCTCGCTG CCGATCGCCC CGGACGCCAG CCACTACCTG GCCCCGTTCA TCATCACGAT CTCGCTGATC GCCGTGATCT ACATCGGCCT CGTGGCACTG GTCCAGGCCG ACATGAAGAA GCTGGTGGCG TACTCGTCGA TCGCTCACAT GGGTTTCGTG ACGCTCGGTT TCTTCATCTT CAATGAAATC GGCATCGAGG GCGGCATCAT CCAGATGATC TCGCATGGTT TCGTGTCGGG CGCGATGTTC CTGTGTATCG GTGTGCTCTA TGACCGCGTG CACTCGCGCC AGATCGCCGA CTACGGCGGT GTGGTGAACG TGATGCCGAA GTTCGCGGCG CTGTCGGTGT TCTTCGCGAT GGCCAACTGT GGCCTGCCGG CTACCTCGGG TTTCGTGGGC GAGTTCATGG TGATCCTGGG TGCTGTCAAG TTCAACTTCT GGATTGGCCT GCTGGCCGCC ACGGCCCTGA TCTTCGGCGC GGCTTACTCG CTGTGGATGG TCAAGCGCGT GATCTTCGGC GATATCGTGC ACGAGCACGT GCGTGAACTG GTGGACCTGA ACAAGCGTGA ATTCTTCATG CTCGGTCTGC TGGCGATCAT GACGCTGTAC ATGGGTCTGT ACCCGAAACC CTTCACCGAC GTGATGCACG CATCGGTGGT GAACCTGCTG TCCCACGTGG CACAGTCCAA GCTGTAA
|
Protein sequence | MVLSFAIWLP IFFGLVVLMF GSDRSKCFVR WMALFGAIVS FAVTLPLIFH FDTASAAMQF VEQATWIERF NIQYHLGVDG ISMWFVVLTA FITVIVVISA WEVITERVAE YMASFLILSG LMVGVFSSLD GLLFYVFFEA TLIPMYIIIG VWGGPNRVYA AFKFFLYTLL GSLLTLVALL YLYNKTGSFD ILTWHQAKLT MNEQIAIFLA FFMAFAVKVP MWPVHTWLPD AHVEAPTGGS VVLAAIMLKL GAYGFLRFSL PIAPDASHYL APFIITISLI AVIYIGLVAL VQADMKKLVA YSSIAHMGFV TLGFFIFNEI GIEGGIIQMI SHGFVSGAMF LCIGVLYDRV HSRQIADYGG VVNVMPKFAA LSVFFAMANC GLPATSGFVG EFMVILGAVK FNFWIGLLAA TALIFGAAYS LWMVKRVIFG DIVHEHVREL VDLNKREFFM LGLLAIMTLY MGLYPKPFTD VMHASVVNLL SHVAQSKL
|
| |