| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0923 |
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| Symbol | |
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| ID | 4037719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1007462 |
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| End bp | 1009639 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976303 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_583078 |
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| Protein GI | 94309868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGT TCAACAAGAT CGTCAAGGAA TTCCAGTGGG GCCAGCACAC GGTCCGCATG
GAAACCGGCG AAATCGCGCG CCAGGCATCT GGCGCCGTGA TCGTCGACGT GGAAGACACC
GTGGTGCTGG CCACCGTGGT GGCAGCCAAG AGCCCGAAGG CGGGTCAGGA CTTCTTCCCG
CTGACCGTCG ACTACATCGA GAAGACCTAC GCTGCTGGCA AGATCCCCGG TGGCTTCTTC
AAGCGTGAAG GCCGTCCGTC GGAAAACGAG ACGCTGACCT CGCGCCTGAT CGACCGTCCG
CTGCGTCCGC TGTTCCCGGA AGGTTTCTAC AACGACGTGC AGGTGGTGAT CCACGTGCTG
TCGATCAACC CGGAAATCCC GGCTGACATC CCCGCGCTGA TCGCTTCGTC GGCTGCGCTG
GCCGTTTCGG GTATCCCGTT CAACGGTCCG GTTGGCGCTG CCCGCGTCGG CTACAAGGAC
GGCCAGTACC TGCTGAACCC GACCCGCGCG CAAATCGCCG CGTCGGATCT GGACCTGGTG
GTCGCCGGTA CCGAACGTGC CGTGCTGATG GTGGAATCGG AAGCCCACCA ACTGTCGGAA
GACGTGATGC TCGGCGCCGT GGTGTACGGT CACGAGCAAA TGCAGATCGC GATCAACGCA
ATCCACGACC TGGTGCGCGA AGGCGGCAAG CCCGAGTGGG ACTGGGCTCC GGCTCCGAAG
AATGAAGCGC TGATCGCCAA GGTTAGCGAG ATTGGCCTGC CGCTGCTGCA GCAAGCCTAC
CAACTGCGTC AGAAGTCGGC GCGCAGCACC AAGCTCAAGG AAATCTACGC AACGGTGCAG
GCCCAACTGG CCGAGGCCGG CGTGGAAGCC GACAAGGTGG AAGTGGGCAA CGTCCTGTTC
GACCTCGAGG CGAAGATCGT GCGCGGCCAG ATCCTGGCTG GCGAGCCGCG TATCGACGGC
CGCGACACGC GCACCGTGCG CCCGATCGAA ATCCGTTCGT CGGTGCTGCC GCGCGCGCAC
GGCTCGGCGC TGTTCACCCG TGGTGAAACG CAGGCACTCG TGGTGGCCAC GCTCGGCACC
AAGAGCGATG AGCAGATCAT CGACGCACTG GCCGGCGAGT ACCGCGATCG CTTCATGCTC
CACTACAACA TGCCTCCGTT CGCCACCGGC GAAACGGGTC GCGTTGGTAG CCCGAAGCGT
CGTGAAATCG GTCACGGCCG TCTGGCCAAG CGCGCGCTGA TCCCGGTGCT GCCGAAGGAC
GACGAGTTCG CGTACACGAT CCGTCTGGTG TCGGAAATCA CCGAATCGAA CGGTTCGTCG
TCGATGGCTT CGGTCTGCGG CGGCTGCCTG GCGCTGATGG ATGCTGGCGT TCCGGTGAAG
GCGCACGTGG CCGGCGTGGC CATGGGCCTG ATCCTGGAGG GCAACAAGTT TGCCGTGCTG
ACCGACATCC TCGGTGACGA GGATCACCTC GGCGACATGG ACTTCAAGGT GGCCGGTACC
GACGCGGGCA TTACCGCGCT GCAGATGGAC ATCAAGGTCC AGGGCATCAC CAAGGAAATC
ATGCAGGTGG CGCTGGCCCA GGCCCGCGAA GGCCGCATGC ACATCCTCGG CGCGATGCAA
GGCGCAATGG GTCACGCTCG CACCGAACTG TCGGCGCACG CTCCGCGCAT GATCACGATG
AAGATCCATC CGGACAAGAT CCGCGAAGTG ATCGGCAAGG GCGGCTCGAC GATCCAAGCA
CTGACCAAGG AAACCGGCAC GACCATCGAC ATCCAGGAAG ACGGCACGAT CACGATCGCG
TCGACGTCGA CCGACGGCAT GGCCGAAGCC AAGCGCCGCA TCGAAGGCAT CACCGCGGAA
GCCGAAGTGG GCAAGATCTA CGCCGGTACC GTGCTGAAGC TGCTGGACTT TGGCGCCATC
GTCAACATCC TGCCGGGCAA GGACGGTCTG CTGCATATCT CCGAGATCGT CAACGAGCGC
GTCAAGGACA TCAAGGACTG GCTCAAGGAA GGCCAACAGG TTCGCGTCAA GCTGATCCAG
GCCGATGAAA AGGGTCGTCT GCGTCTGTCC CTGAAGGCAG CGCTGGCCGA AGAGGGCGGC
AGCATCAGCC CGATCGCGCA AGGCGATGCA CCGGCCGCGG CACCTGCCGC CCCGGCATCG
CCCGATCAGC AGCAGTAA
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| Protein sequence | MTMFNKIVKE FQWGQHTVRM ETGEIARQAS GAVIVDVEDT VVLATVVAAK SPKAGQDFFP
LTVDYIEKTY AAGKIPGGFF KREGRPSENE TLTSRLIDRP LRPLFPEGFY NDVQVVIHVL
SINPEIPADI PALIASSAAL AVSGIPFNGP VGAARVGYKD GQYLLNPTRA QIAASDLDLV
VAGTERAVLM VESEAHQLSE DVMLGAVVYG HEQMQIAINA IHDLVREGGK PEWDWAPAPK
NEALIAKVSE IGLPLLQQAY QLRQKSARST KLKEIYATVQ AQLAEAGVEA DKVEVGNVLF
DLEAKIVRGQ ILAGEPRIDG RDTRTVRPIE IRSSVLPRAH GSALFTRGET QALVVATLGT
KSDEQIIDAL AGEYRDRFML HYNMPPFATG ETGRVGSPKR REIGHGRLAK RALIPVLPKD
DEFAYTIRLV SEITESNGSS SMASVCGGCL ALMDAGVPVK AHVAGVAMGL ILEGNKFAVL
TDILGDEDHL GDMDFKVAGT DAGITALQMD IKVQGITKEI MQVALAQARE GRMHILGAMQ
GAMGHARTEL SAHAPRMITM KIHPDKIREV IGKGGSTIQA LTKETGTTID IQEDGTITIA
STSTDGMAEA KRRIEGITAE AEVGKIYAGT VLKLLDFGAI VNILPGKDGL LHISEIVNER
VKDIKDWLKE GQQVRVKLIQ ADEKGRLRLS LKAALAEEGG SISPIAQGDA PAAAPAAPAS
PDQQQ
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