| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0880 |
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| Symbol | |
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| ID | 4037675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 963898 |
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| End bp | 964983 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637976260 |
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| Product | porin |
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| Protein accession | YP_583035 |
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| Protein GI | 94309825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0359628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC AGTACAAGCC GGCTCTCAAG CTGGCGGCGA TCGCAGCCAC CCTTTTCTCC
GGCGCGGCCA TGGCCCAGTC CAGCGTGACG CTGTACGGCA TGGCCGATGC TTTCATCGGA
GGCGTCAAGA ATCCGGGCTC GGGCGACCGC GCCTACGTAG TCAACTCGGG TGGCATGCAA
ACCTCGTACT GGGGCATCAA GGGTACCGAG GACCTGGGCA TGGGCACGAA GGCCATCTTC
GACCTGAACG GCTTCTTCCG CCCCGACACC GGTAGCATGG GCCGCTTCAC CGGCGACTCG
ATGTTCAGCC GCAATGCCTT CGTCGGCCTG ACGAACGAAA CCTACGGCAC GCTGAAGATC
GGCCGCAACA CGACGCCGTA CTTCGTGTCG ACGATCCTGT TCAACCCGCT GGTCGACTCG
TACACGTTCA GCCCGATGAT CTTCCACACG TACTTCCCGA CGCCTCAAAA CGTTGGCGGC
GTGTCCGATC CGGGCATCCT GGGCGATTCG GGCTGGAACA ACTCGCTGCT GTACTCGACG
CCGAACTTCG GTGGCCTGAC CGCGAACTTC ATCTACGGCT TTGGCGAATC GCCCGGTAAC
AACGGCAAGA ACAAGTGGGG CGGCAACCTG ACCTACTTCT CCGGCAACTT CGCGGCGACG
CTGGCATTCC AGCAGGTCAA GTTCGACGTT GCTCCGTTTG ACCCGCAGAA TGCCAATCTC
GCGGGCCTCG ACAAGCAGTC CGCCGTCCAG GCTGGCGTGA CGTACGACTT CAAGATCGTC
AAGGCCTTCC TGCAAGGCCA GTACATCAAG ACCAACTTCA ACACGAGCAC CAATGGCGGC
GACATCAAGC ACATCGACGG CCAGGCCGGC GTCGCGGTGC CGGTTGGCGC AGGCAATATC
CTGGCGTCGT ACACCTACGG CCGCGTGCTG AACGAAGTTG CTGGCATCAA GCGCAATACG
TTCGCCGTCG CCTACGACTA CAACCTGTCG AAGCGCACCG ACGTCTACGG TGCCTACTAC
TACGACAAGG TGTCGGGCGT CGAGCACGGC GACACCTTCG GCGTCGGCGT TCGCCACCGC
TTCTGA
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| Protein sequence | MKKQYKPALK LAAIAATLFS GAAMAQSSVT LYGMADAFIG GVKNPGSGDR AYVVNSGGMQ
TSYWGIKGTE DLGMGTKAIF DLNGFFRPDT GSMGRFTGDS MFSRNAFVGL TNETYGTLKI
GRNTTPYFVS TILFNPLVDS YTFSPMIFHT YFPTPQNVGG VSDPGILGDS GWNNSLLYST
PNFGGLTANF IYGFGESPGN NGKNKWGGNL TYFSGNFAAT LAFQQVKFDV APFDPQNANL
AGLDKQSAVQ AGVTYDFKIV KAFLQGQYIK TNFNTSTNGG DIKHIDGQAG VAVPVGAGNI
LASYTYGRVL NEVAGIKRNT FAVAYDYNLS KRTDVYGAYY YDKVSGVEHG DTFGVGVRHR
F
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