Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0850 |
Symbol | |
ID | 4037642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 930787 |
End bp | 932046 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976227 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_583005 |
Protein GI | 94309795 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.260825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGA TCGTCCCTGT CGGCGGTGGC ACGCCGGCCA CATCCTCGCC GCTATCCCCT GCCGACAACC AGAAGCTTTG GCTCAAGCCG GGCCAGATCG CCCTGCCCGG CTCGCCGCCG CTTTCTCTCT ACGTGCACAT CCCATGGTGC GTGCGCAAAT GCCCGTACTG TGATTTCAAC TCGCACGCGG CACCGGGAAA GCCGGATAGC CACGAGATTC CCGAGGACGC CTACCTCGAC GCGCTACGCG CAGATCTTGA GCAATCGCTG CCACTGGTAT GGGGACGTCC CGTGCATACG GTGTTTATCG GCGGCGGCAC ACCGAGCCTG CTGTCGGCCG CTGGCATGGA CCGCCTGCTA TCGGACATCC GCGCGCTGCT ACCGCTCGAT GCCGATGCCG AGATTACGAT GGAAGCCAAC CCCGGCACCT TCGAAGCCGA ACGGTTCGCA AGCTATCGCG CCAGCGGCAT CAACCGGCTG TCGATCGGCA TCCAGAGTTT CAACGACGCC CACTTGAAAG CGCTTGGCCG GATCCACGGC GAGCGCGAGG CACGCGCGGC CATCGACATC GCGCTGAAGC ACTTCGACAA CGTCAATCTG GACTTGATGT ATGCGCTGCC GGGGCAGACC CTGGACGAAT GCGCGCGCGA CCTGGACGCA GCGTTGTCGT ACGGCACCAC GCACCTGTCG CTCTATCACC TGACGCTGGA ACCGAACACG CTGTTTGCGA AGTTTCCGCC CGCGCTGCCG GACGAGGACA CCGCCTACGA GATGCAGGAC ATCGTCGAGG CCCGTACGGC TCAGGCTGGG TATCGCCACT ACGAGACATC GGCCTATGCG AAGCCGCATC GCGAGGCGCG CCACAACCTC AACTACTGGC GCTTCGGCGA CTACCTCGGC ATCGGCGCCG GCGCCCACGG CAAGCTTTCG TTTCCAAACC GGATCCTGCG GCAGATGCGA CACAAGCACC CGGCCACTTA TATGGAGCAG GCCCTGGCTG GCAACGCCGT GCAGGAAGCG CGCGAAGTCG GCGCTGACGA ACTCCCGTTC GAATTCATGC TCAACGCGCT GCGTCTGACG GACGGCGTGC CGGCATCGAG TTTCCACGAC TACACCGGCC TGCCATTGCA CATGATCGGC AAGCAGCTTG CCGCAGCCGA GAAGAAGGGA CTGCTCGACG CCGACCCTAC CGTGATCAAG CCGACTGAAC TCGGCCGACG CTTCCTCAAC GACCTGCAGG AGATGTTCCT GAAGGATTGA
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Protein sequence | MIPIVPVGGG TPATSSPLSP ADNQKLWLKP GQIALPGSPP LSLYVHIPWC VRKCPYCDFN SHAAPGKPDS HEIPEDAYLD ALRADLEQSL PLVWGRPVHT VFIGGGTPSL LSAAGMDRLL SDIRALLPLD ADAEITMEAN PGTFEAERFA SYRASGINRL SIGIQSFNDA HLKALGRIHG EREARAAIDI ALKHFDNVNL DLMYALPGQT LDECARDLDA ALSYGTTHLS LYHLTLEPNT LFAKFPPALP DEDTAYEMQD IVEARTAQAG YRHYETSAYA KPHREARHNL NYWRFGDYLG IGAGAHGKLS FPNRILRQMR HKHPATYMEQ ALAGNAVQEA REVGADELPF EFMLNALRLT DGVPASSFHD YTGLPLHMIG KQLAAAEKKG LLDADPTVIK PTELGRRFLN DLQEMFLKD
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