| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0837 |
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| Symbol | |
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| ID | 4037628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 915139 |
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| End bp | 917418 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637976213 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_582992 |
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| Protein GI | 94309782 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.213171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.109269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAAA AAATCCTATC GAGTGCCATC CGCGTGCTGG TTTCTGGCGC GGCCTCAGCC
GGTCTGGCAA TCTCCGTGTC AGCTGTTCCG CTGGTCGTAC ATGCGCAAAC CGCGCCTGAA
GGTCAGAGTT CGGCTGGATC GGCCGACGAC AGAAATGTGC TGCCGTCTGT CACGGTAACG
GGCAAGGGTG TTCCAAACAC CAATGACGCA CCGACGGGGA TCTCTCGTCT GCCGGAGACC
ATCAAGGAAA CGCCCAAGAC GATCAACGTC GTGCCCAAGG AGGTTATCGA GCAGCAGCAG
GCCACTTCGC TCGAACAGAT CCTGAAGAAC GTGCCGGGCA TTACGATTTC CACGGGTGAG
GGCAACGGCG GGCAGAACGG CGACCAGTTC CGCATTCGCG GCCTTTCCGC CAAGGGCGAC
ATCTATGTCG ATGGTCTGCG GGACTTCGGC GCATACAAGC GCGACAGCTT CAACACCGAA
AGCGTGGAAG TGATCAAGGG ACCGTCGGGT GAGACGTTCG GCGTGGGCAA TATCGGTGGT
CTGATCAACC AGTCGACCAA GCGGGCGAAC CTGAACACGA GCACCAGCAT CGACCAGGGC
GTCGGGTCGG CGTCGACGTA CCGCACGACG GTCGACAGCA ATATCCGCCT GAATGATACG
TCCGCCGTAC GTATCAACGG CGTGTTCCAG AATGGCCGTG TCGCGGATCG CGACCATGTC
GACGACGACC GCCGCGGTAT CGCCATCGAT TTCGGCACCG GCCTCGGCAC CAGCACGGAA
TGGCACCTGA ATTACTCCTA CCTGCACCGT AGCGGCGCGC CGGATTTCGG TGTGCCGCTG
GCGCAGGGTG CGGATGGCAT CTTCCGTCCG CTGCCTGAGT ACAACGTACC GGGTTACGCG
TCGTCGACGT CCTACGTCCG CAATACCGAC CGCGACATCA CCGACGCCCA TATCGTCTCG
TCGTCGTTCA TGAAACGACT CGACAACGGC ATCACCATCA ACAACGACAC GCGTTTCAGC
TTCTACGAGC GCGATTTCTC GTCAACCAAC CCGGCGTCGC TCAACTACGC GAGCCTGCAG
CGGTTGCTGG CGGGCGGCAA CGTGAGTTTG TCGTACGGCG CGGGCGGCGG CTCCACCTAT
CTGCAGCGCG GCTGGGGCAT TCAGAACGTG CTGAGCGCCA AGGGCGAGTT CTATACCGGT
AGCTTCCGCC ACAAGGCCAT GGTCGGCCTG GATACGATCT ATCAGCGTGA CCATCGCGAC
ATGGGCACGT GGACGGGCCG CATGAACAAC CAGACCGTCA TGAACCCGAT TTTCTACAAC
AGCCCGGGTG CGACGGTCAG TTATGGCGGC ACCACGCGCG ATGCGAACTC GATCGACGTT
GGCGTATTCG CCAACGACCG CGTCTGGTTC AACGACCAGT TCTCGTTGAT GGGCAGCCTG
CGCTGGGACT ACTTCCGCAG CGAGTATTCG ACCAACGCGT CCTCGGTCGG TGGCGTATCC
GATTCGAAGA AGCTGAGCCC GGCTATCAGC GCGATCTGGG AGCCGACCAA GGACTACATG
TTCTACACGT CGTTCTCGCG CACCTATCGT CCGGTCGGGA CCGATATCGC GGTGGCGGTC
GGCGGCGTGC AGTCCGAGGT GCCGCAGAAC GGCGTCAACA CCGAGCCAGA GCGTGCCGAC
ACGATCGAAG TGGGCGCCAA GCTGGATTTC CTCGAAAAGC GCCTGGGCGT GACCGGTGCG
ATCTTCCAGA CGAAGAAGTA CAACGCGTAC ACGGTTGACC CGATCACCGG AGACATCACC
AACGGTTTCT CGGATTCGGG TGAAGGCCGA CGCATCCGCG GCGCGGAAAT TGGCCTGAGC
GGGCGGATTA CGAACAACTG GTCGGCCACG ATGGCATATG CCTACCTGGA CGGCATCGTC
ACCTCGGCCA CGGCGCCTAC CTCGATTGGC AATGTCGCCC CTGGCGTCTC GCGTCACAAT
GTGACGCTCT GGACCAGCTA TGACATTCCG CACACGATCC TGCCGCTGCC CGGCCGGCTC
ACGGTGGGTG GTGGTCTCCA GTACGCCTCG GCCTATTGGG CGGACACCGC GAACACCGCG
CGTATGCCCG ATAACTTCTC GCTCGATGCG ATGATCGGTT ACAAGCAGGG CAAGTTTCGC
GCGTCGCTCA ATGCCTACAA CCTGACGAAT CGCCTGAACT ATCAGTCGTC GTTCAACGTG
GCACGTGCCG TACCCGCATC CGGGCGGACG TTCCTGTTTA ACGTCGGCAT GACGTTCTAA
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| Protein sequence | MQQKILSSAI RVLVSGAASA GLAISVSAVP LVVHAQTAPE GQSSAGSADD RNVLPSVTVT
GKGVPNTNDA PTGISRLPET IKETPKTINV VPKEVIEQQQ ATSLEQILKN VPGITISTGE
GNGGQNGDQF RIRGLSAKGD IYVDGLRDFG AYKRDSFNTE SVEVIKGPSG ETFGVGNIGG
LINQSTKRAN LNTSTSIDQG VGSASTYRTT VDSNIRLNDT SAVRINGVFQ NGRVADRDHV
DDDRRGIAID FGTGLGTSTE WHLNYSYLHR SGAPDFGVPL AQGADGIFRP LPEYNVPGYA
SSTSYVRNTD RDITDAHIVS SSFMKRLDNG ITINNDTRFS FYERDFSSTN PASLNYASLQ
RLLAGGNVSL SYGAGGGSTY LQRGWGIQNV LSAKGEFYTG SFRHKAMVGL DTIYQRDHRD
MGTWTGRMNN QTVMNPIFYN SPGATVSYGG TTRDANSIDV GVFANDRVWF NDQFSLMGSL
RWDYFRSEYS TNASSVGGVS DSKKLSPAIS AIWEPTKDYM FYTSFSRTYR PVGTDIAVAV
GGVQSEVPQN GVNTEPERAD TIEVGAKLDF LEKRLGVTGA IFQTKKYNAY TVDPITGDIT
NGFSDSGEGR RIRGAEIGLS GRITNNWSAT MAYAYLDGIV TSATAPTSIG NVAPGVSRHN
VTLWTSYDIP HTILPLPGRL TVGGGLQYAS AYWADTANTA RMPDNFSLDA MIGYKQGKFR
ASLNAYNLTN RLNYQSSFNV ARAVPASGRT FLFNVGMTF
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