| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0732 |
|---|
| Symbol | |
|---|
| ID | 4037523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 809732 |
|---|
| End bp | 810958 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637976108 |
|---|
| Product | lytic murein transglycosylase B |
|---|
| Protein accession | YP_582887 |
|---|
| Protein GI | 94309677 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.351039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTGCC CCGCGCTTCT ACGCCTGTTG GCTGTCGTGT ACGGCGCACC GAAGTACGCC
CTCGACGAGG CGTCGCGTAC ATCGCATCCG CTATACTCGG TGCGACTTGC AAAGGACAAC
ATGACCGACC ACCAGCGCAC CCTGCGCCGC CCGCTGCTGG GCGCCGCACT CACCGCTGCC
GCATTGGGCC TGTGCGGCAT TTCTCCTCGG CTTCTCGCCG CCGGCAAGCG CCGCGTGAGC
GTCCGGGAAG AAGAGATCGA ACCGGGCCGC TATCAGAATC ATCCGCAAAC CCGCGCATTC
ATCGACGAGA TGGTGGCCAA CAACGGCTTC CAGCGGGCCG AACTCGAGGG ATGGTTCAGC
CAGGCGGTCT ATTCCACGAC GGTCGCACGA CTGATCATGC CGCCGACCAC CCCGGGCAAG
AAAAGCTGGC GGGCGTATCG GTCACGCTTC ATCGAACCGA TCCGCATCAA CGCCGGCGTG
CGCTTCTGGC AGCAGAACCG CGAGACGCTG CGTCGCGCCG AGGCCGAGTT CGGCGTGCCG
GCATCGGTCA TCGTCGGCAT CATCGGGGTG GAGACGATCT ACGGGCGCGA CATGGGCAAC
TTCCGCGTCC TGGACTCGCT CTCGACGCTG GCGTTCGACT ACCCCGACAC CCCGAACCGT
GAGGCGCGCA CCAAGCTCTT CCGGAATCAG CTCGCCGACT ACCTGCTCTG GTGCCGCGAC
ACCAAGACCG ACGTATTTTC GGTGCTGGGC TCCTATGCCG GCGCAATCGG CATTCCGCAG
TTCATGCCCA CGAGCCTGCG CGAGTACGCG GTCGACTACG ACGGCGACGG GCATATCGAC
CTGCGCAACA GCCCGACCGA TGCCATTGGC AGCGTCGGCC GATTCCTGCA ACTGCATGGC
TGGGAACAGG GACGTCCGGT GGTCTGGCAG ATCGCCAACG ACGATGGCAG CCGAGGCGTT
GCCGCGGCTG CGGCCGACGG CGAACCGTGG CCGACACGCA CACTCAACCA GCTCACGCGC
GCCGGACTTC GCGTAGACGA ACCGATCGAC GTCACCCGCG AAGGCGAAAC AGGCGTGTTG
ATTGCCGATC TCCCGACGCC CGACCAGCCG ACCGAGTACG TGATCGGCCT GCGCAATTTC
TACGTGCTGA CGCGGTACAA CCGAAGCTTC TTCTATGCGC TGACGGTGTA TCAGCTTGGG
GAAGCCGTGA AGGCCGCCAT GGCCTGA
|
|---|
| Protein sequence | MTCPALLRLL AVVYGAPKYA LDEASRTSHP LYSVRLAKDN MTDHQRTLRR PLLGAALTAA
ALGLCGISPR LLAAGKRRVS VREEEIEPGR YQNHPQTRAF IDEMVANNGF QRAELEGWFS
QAVYSTTVAR LIMPPTTPGK KSWRAYRSRF IEPIRINAGV RFWQQNRETL RRAEAEFGVP
ASVIVGIIGV ETIYGRDMGN FRVLDSLSTL AFDYPDTPNR EARTKLFRNQ LADYLLWCRD
TKTDVFSVLG SYAGAIGIPQ FMPTSLREYA VDYDGDGHID LRNSPTDAIG SVGRFLQLHG
WEQGRPVVWQ IANDDGSRGV AAAAADGEPW PTRTLNQLTR AGLRVDEPID VTREGETGVL
IADLPTPDQP TEYVIGLRNF YVLTRYNRSF FYALTVYQLG EAVKAAMA
|
|---|
| |