Gene Rmet_0686 details

Gene Information

• Locus tag: Rmet_0686
• Symbol: lolA
• ID: 4037475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007973
• Strand: +
• Start bp: 760008
• End bp: 760652
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637976061
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_582841
• Protein GI: 94309631
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.973881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.650962
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGATATC GCATTCTTGC TCCCCTGGTT TCCCTGGGCG CCGCACTGGC ACTGCTGGCG 
GCTGCGCCAG TCGCGCAGGC GGCGGCAACC GACCAGTTGC AAAGCTTCGT GACCAGCGTG 
AAGACGGCTC GCGGCGAGTT CACGCAGCAG CAAATGAAGG GGAAGGGCGC CGATCTCAAG 
GTAGCCAGCA CGTCGAGCGG GACGTTTGTG TTCTCGCGCC CCGGCAAGTT CGCGTGGCGC 
TATACCAAGC CATACGAGCA ACTGCTGCAG GCCGACGGCC AGGTCCTCTA CATCTACGAC 
AAGGACCTGA ACCAGGTGAC CGAGCGCAAG CTCGATGGCG CGCTCGGGTC GAGCCCGGCG 
GCCATCCTGT TCGGCAGCAA TGACCTGTCG AAGAACTTCG ACGTGAAGAA TGGGGCCACG 
CGGGATGGCG TGGAATGGCT GGAACTGACG CCGAAGGAAA AGGACACGCA GTTCGAGCGG 
ATCGGCATCG GTTTCAAGGG CGGCAATCTC GAGGCGATGG AGTTGCGTGA CGCCTTCGGC 
AACACGACCA TCCTGACTTT CTCGGCGATC CAGAAGAATC CGTCGCTGCC CGCAGATGCA 
TTCCGCTTCA CGGTGCCCAA GGGTGCCGAT GTGATGAAGC AGTGA 

 

Protein sequence

MRYRILAPLV SLGAALALLA AAPVAQAAAT DQLQSFVTSV KTARGEFTQQ QMKGKGADLK 
VASTSSGTFV FSRPGKFAWR YTKPYEQLLQ ADGQVLYIYD KDLNQVTERK LDGALGSSPA 
AILFGSNDLS KNFDVKNGAT RDGVEWLELT PKEKDTQFER IGIGFKGGNL EAMELRDAFG 
NTTILTFSAI QKNPSLPADA FRFTVPKGAD VMKQ