| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0635 |
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| Symbol | |
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| ID | 4037424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 700962 |
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| End bp | 702782 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976010 |
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| Product | hypothetical protein |
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| Protein accession | YP_582790 |
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| Protein GI | 94309580 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0758526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC CCGCCCAAGA CAACGAGATC CTGCGTTACT ACGAAGCCGA GATGCGCTAC
CTGCGCGAAG CCGGCAAGGA GTTCGCACAG GCGTTCCCTG ACCGCGCCCG TATGCTCAAC
ATCGACCGTA TCGGCGAGCG GGACCCTCAC GTCGAACGGC TGTTCGAGGG CTTCGCATTC
CTGATGGGGC GGCTGCGCCA TAAGCTGGAC GATGAGTTGC CGGAACTGAC CGAGGGCCTG
GTCAGCATGC TGTGGCCGCA TTACCTGCGC ATGATCCCGT CATTGTCGAT CCTGGAACTG
TCCCCGAACG TTGGAGCGCT GCAGCGCCAT GAAACGCTGC CGGCCGGACT GGAGGTGGTC
TCCGATCCCA TTGCGCTCGC CACACAAGAC GGGATTGAAG GGAGTGTCGA ATGCATTTAC
CGGACCACGC AACCAGTCGA TCTATACCCG TTGCGCCTTA CTGAAGCCAA TGCCTATGCG
CGCGAGGATG GCCGCTCGGT CATCCGGCTG CGGCTGGCAC TACAAACTCA GGGGCGCCGC
GAGCAGTTGG CGGTGCCGCG CCTGCGGCTC TACCTGCATG CCGATCGCCC GCTGGCGTTG
GCGCTTTACT CAGCGCTCAC CGCTAAGCCA TTGGCCATGC AAGTGCGGGT ACCGGGCTAT
CCGGCCGACC GGCCCGGCGC ACCCCAGCCG ATGGCAGGGA TACGGTTGGA GCCAGCCGGA
TTCGCTGCCG AGGAACGCCT GTGGCCGAAG GCTGACAACG CCTTCGGCGG CTACCAACTG
TTGCTGGAGT ACTTCACCTT CCCCGAGAAG TTCATGTTCG TGGATCTCGT GGGGCTCGAT
CTGGACGCCA TCCCGGAAGG CGTCGAGCAC TTTGATGTGG AGGTGGTACT CAATCGGCCG
TTCCCGGATG ACATGCGCTT CTCGGCCGAT AACGTGCGCC TCTTTTGCAC GCCGATCATC
AACCTGTTCG AGCTGGAAGC CGACCCGATC ACCATCACCC ACTTCGAGAC CGAGTACCGC
GTGCGGGCCA TGGAGCAGCA TGGACAACAT GTGGAACCCT ATTCGGTGGA AACCGTACGG
GGATTCGAGA CGGGCAGTGG CAAGCGCTTC GAGTACGCGC CTTTCGCCGC GTTCCGCCAT
CGGGGCGGCA TGCTGCGTCA TGAGATGCCG GAGCGCTATT TCCACACCCG CGTGCGCCGC
GGTCCTTCGG GGAGGTTCGA CACTTGGGTT GTGCTGGGAG GGCACGCCTG GGATCATCAG
CAGTTCCTGC CCGAGGAGAC GTTGTCGCTG TCGGTCACCG GCACCAACGG CATGCTGCCG
CGCAAGGGCT TGCGCGAGGC AGGCATCACC CGCACGAGCG GGGGATTCAC GCACATTGGC
ACCGTACGCA ATTTGACCGC GCCGACGATG CCCGTGTATC CGCCCTCCGG CGATCGCTTC
CATTGGCGCG TGCTATCGCA CCTGGCGCCC AACTACCTGT CGCTGCTCGA CGCCGAAGTT
CTGCGCGGCA GCCTGGCGCT GTACGACTGG ACCGATGGGG AACTGAACCG TCGGCGTATC
GAGGCCATCA CAGACGTGCG GCACCGCCCG CTCCAGAAGC TCGTCAAAGG CGGCCTGTTG
CGCGGCGTGG AGATCGAAGT GGTGCTGGAT AGCACGCGCT TCGCCGGCGA AGGCGATGTG
GAACTCTTTG GCGAGATGCT CAACCGCTTC CTGTCGCTGT ACGCTACCGT CAATCTCTAT
ACGCGCCTGG TGATCGTGTC GCAGCCTAGC GGCAAGCACC AGGTGTGGCC CGACAGCAAA
GGGGAGGGGG CTCCGTTTTG A
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| Protein sequence | MNHPAQDNEI LRYYEAEMRY LREAGKEFAQ AFPDRARMLN IDRIGERDPH VERLFEGFAF
LMGRLRHKLD DELPELTEGL VSMLWPHYLR MIPSLSILEL SPNVGALQRH ETLPAGLEVV
SDPIALATQD GIEGSVECIY RTTQPVDLYP LRLTEANAYA REDGRSVIRL RLALQTQGRR
EQLAVPRLRL YLHADRPLAL ALYSALTAKP LAMQVRVPGY PADRPGAPQP MAGIRLEPAG
FAAEERLWPK ADNAFGGYQL LLEYFTFPEK FMFVDLVGLD LDAIPEGVEH FDVEVVLNRP
FPDDMRFSAD NVRLFCTPII NLFELEADPI TITHFETEYR VRAMEQHGQH VEPYSVETVR
GFETGSGKRF EYAPFAAFRH RGGMLRHEMP ERYFHTRVRR GPSGRFDTWV VLGGHAWDHQ
QFLPEETLSL SVTGTNGMLP RKGLREAGIT RTSGGFTHIG TVRNLTAPTM PVYPPSGDRF
HWRVLSHLAP NYLSLLDAEV LRGSLALYDW TDGELNRRRI EAITDVRHRP LQKLVKGGLL
RGVEIEVVLD STRFAGEGDV ELFGEMLNRF LSLYATVNLY TRLVIVSQPS GKHQVWPDSK
GEGAPF
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