Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0610 |
Symbol | |
ID | 4037399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 663588 |
End bp | 665300 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637975985 |
Product | AMP-binding domain protein |
Protein accession | YP_582765 |
Protein GI | 94309555 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.920315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.508617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGC AACCGGGAAC CTCCCTGCCC ATTGGGGGGC TGTCTTACGT GAAAGGGGCC GACACCCCAC CACTCAGCGA ACTGACGGTG CCTGCGCTGC TGGCGAACAC TGCCGCGCTC CACGGCAGCC GGCCGGCGGT GGTATTCCGG GAGCAGAACA TCCGCTGGAC CTGGAATGAA TTCAGCGCCG AAGTGGACAG GATGGCCTCC GGCCTCCACG CGCTGGGCCT GCGCAAGGGC GACCGGGTCG GCATCTGGTC CCCTAACCGC TTCGAGTGGC TGCTGACGCA GTTTGCTACG GCCCGGGTTG GCCTGGTCAT GGTCAACATC AACCCGGCGT ACCGCCTTGC GGAACTCGAA TACGCGCTGA ACAAGGTTGG CTGCAAGGCG ATCATCGCGC CGGAAGCATT CAAGACCTCG CGCTACCTGG ACATGCTGGC AACACTGGCC CCCGAGTTGG CCAAAGCCGA ACCGGGCGCG CTGAACGCCG CCCGGCTGCC GCTGCTGCGC TGGGTTATCC GCATGGAAGA CGTGCCGACG CCCGGCATGC TGACCTTCCG CGAGTTGCTG GCGCGCGGCG CAAACGTGCC AAAGACTGAG CTCGACGAGA TCACCGCCGG ACTCGACGCG CGCGACCCCA TCAATATCCA GTTCACCAGC GGCACCACCG GCGCGCCCAA GGGCGCCACG CTCACGCACC GCAACATCGT CAACAACGGC CGTTCGATCG CGGGCGCGAT GCGGTTTTCC GAACAGGACA AGCTCTGCAT CCCGGTGCCG TTCTACCACT GCTTCGGCAT GGTGCTGGGC GTGCTGGCCT GCGTGTCCAC CGGGGCCAGC ATGGTGTTCC CGGGTGAGGC ATTCCACCCC GGCGCCACGA TGGCCGCCGT CAGCGAGGAA CGCTGCACGG CCCTGCATGG CGTGCCGACC ATGTTCATCG CGCAACTCGA CGACCCCGAC TTCTCGAAGT ACGACTTTTC CAGCCTGCGC ACCGGCATCA TGGCCGGCGC GCCCTGCCCG GTGGAAGTCA TGAAGCGCGT CATGGCGGAC ATGCACCTGG CCGAGATCAC CATTGCCTAT GGCATGACCG AAACCAGCCC GGTGTCGTTC CAGAGCGCCA CCGACGATCC GATCGACAAG CGGGTGTCGA CGGTCGGCCG CGTGCAGCCG CATCTGGAAT GCAAGGTGGT CGACGTGGAT GGCCAGACGC TGCCCATCGG CGCCACCGGT GAACTCTGCA CGCGCGGCTA CTCGGTGATG CTTGGCTACT GGGACGACGA GGAACGCACG CGCGAGGCAA TCCGCGACGG CTGGATGCAC ACCGGCGACC TGGCCACGAT CGACGAAGAG GGCTACTGCA ACATCGTCGG CCGCGTGAAG GACATGCTGA TCCGCGGCGG CGAGAACGTC TACCCGCGCG AGATCGAGGA ATTCCTGTTC CGGCACCCGA AAGTCCAGTC CGTGCAGGTC TTCGGCGTGC CCGACGAGAA GTACGGCGAG GAAGTCTGCG CCTGGATCGT CCTGAAGCCG GGCCAGAGCG CCACCGACGA GGAAATCCGG AATTACTGCC GCGACCAGAT TGCCCACTAC AAGATCCCCC GTTACATTCG CTTTGTAGAC GAGATGCCCA TGACGATCAC CGGCAAGGTG CAGAAGTTCG TCATGCGGGA CCAGATGACC CAGGAACTCG GAATCAGCCC CAAGGCCAAG TGA
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Protein sequence | MAMQPGTSLP IGGLSYVKGA DTPPLSELTV PALLANTAAL HGSRPAVVFR EQNIRWTWNE FSAEVDRMAS GLHALGLRKG DRVGIWSPNR FEWLLTQFAT ARVGLVMVNI NPAYRLAELE YALNKVGCKA IIAPEAFKTS RYLDMLATLA PELAKAEPGA LNAARLPLLR WVIRMEDVPT PGMLTFRELL ARGANVPKTE LDEITAGLDA RDPINIQFTS GTTGAPKGAT LTHRNIVNNG RSIAGAMRFS EQDKLCIPVP FYHCFGMVLG VLACVSTGAS MVFPGEAFHP GATMAAVSEE RCTALHGVPT MFIAQLDDPD FSKYDFSSLR TGIMAGAPCP VEVMKRVMAD MHLAEITIAY GMTETSPVSF QSATDDPIDK RVSTVGRVQP HLECKVVDVD GQTLPIGATG ELCTRGYSVM LGYWDDEERT REAIRDGWMH TGDLATIDEE GYCNIVGRVK DMLIRGGENV YPREIEEFLF RHPKVQSVQV FGVPDEKYGE EVCAWIVLKP GQSATDEEIR NYCRDQIAHY KIPRYIRFVD EMPMTITGKV QKFVMRDQMT QELGISPKAK
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