Gene Rmet_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0610 
Symbol 
ID4037399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp663588 
End bp665300 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content65% 
IMG OID637975985 
ProductAMP-binding domain protein 
Protein accessionYP_582765 
Protein GI94309555 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.920315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.508617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGC AACCGGGAAC CTCCCTGCCC ATTGGGGGGC TGTCTTACGT GAAAGGGGCC 
GACACCCCAC CACTCAGCGA ACTGACGGTG CCTGCGCTGC TGGCGAACAC TGCCGCGCTC
CACGGCAGCC GGCCGGCGGT GGTATTCCGG GAGCAGAACA TCCGCTGGAC CTGGAATGAA
TTCAGCGCCG AAGTGGACAG GATGGCCTCC GGCCTCCACG CGCTGGGCCT GCGCAAGGGC
GACCGGGTCG GCATCTGGTC CCCTAACCGC TTCGAGTGGC TGCTGACGCA GTTTGCTACG
GCCCGGGTTG GCCTGGTCAT GGTCAACATC AACCCGGCGT ACCGCCTTGC GGAACTCGAA
TACGCGCTGA ACAAGGTTGG CTGCAAGGCG ATCATCGCGC CGGAAGCATT CAAGACCTCG
CGCTACCTGG ACATGCTGGC AACACTGGCC CCCGAGTTGG CCAAAGCCGA ACCGGGCGCG
CTGAACGCCG CCCGGCTGCC GCTGCTGCGC TGGGTTATCC GCATGGAAGA CGTGCCGACG
CCCGGCATGC TGACCTTCCG CGAGTTGCTG GCGCGCGGCG CAAACGTGCC AAAGACTGAG
CTCGACGAGA TCACCGCCGG ACTCGACGCG CGCGACCCCA TCAATATCCA GTTCACCAGC
GGCACCACCG GCGCGCCCAA GGGCGCCACG CTCACGCACC GCAACATCGT CAACAACGGC
CGTTCGATCG CGGGCGCGAT GCGGTTTTCC GAACAGGACA AGCTCTGCAT CCCGGTGCCG
TTCTACCACT GCTTCGGCAT GGTGCTGGGC GTGCTGGCCT GCGTGTCCAC CGGGGCCAGC
ATGGTGTTCC CGGGTGAGGC ATTCCACCCC GGCGCCACGA TGGCCGCCGT CAGCGAGGAA
CGCTGCACGG CCCTGCATGG CGTGCCGACC ATGTTCATCG CGCAACTCGA CGACCCCGAC
TTCTCGAAGT ACGACTTTTC CAGCCTGCGC ACCGGCATCA TGGCCGGCGC GCCCTGCCCG
GTGGAAGTCA TGAAGCGCGT CATGGCGGAC ATGCACCTGG CCGAGATCAC CATTGCCTAT
GGCATGACCG AAACCAGCCC GGTGTCGTTC CAGAGCGCCA CCGACGATCC GATCGACAAG
CGGGTGTCGA CGGTCGGCCG CGTGCAGCCG CATCTGGAAT GCAAGGTGGT CGACGTGGAT
GGCCAGACGC TGCCCATCGG CGCCACCGGT GAACTCTGCA CGCGCGGCTA CTCGGTGATG
CTTGGCTACT GGGACGACGA GGAACGCACG CGCGAGGCAA TCCGCGACGG CTGGATGCAC
ACCGGCGACC TGGCCACGAT CGACGAAGAG GGCTACTGCA ACATCGTCGG CCGCGTGAAG
GACATGCTGA TCCGCGGCGG CGAGAACGTC TACCCGCGCG AGATCGAGGA ATTCCTGTTC
CGGCACCCGA AAGTCCAGTC CGTGCAGGTC TTCGGCGTGC CCGACGAGAA GTACGGCGAG
GAAGTCTGCG CCTGGATCGT CCTGAAGCCG GGCCAGAGCG CCACCGACGA GGAAATCCGG
AATTACTGCC GCGACCAGAT TGCCCACTAC AAGATCCCCC GTTACATTCG CTTTGTAGAC
GAGATGCCCA TGACGATCAC CGGCAAGGTG CAGAAGTTCG TCATGCGGGA CCAGATGACC
CAGGAACTCG GAATCAGCCC CAAGGCCAAG TGA
 
Protein sequence
MAMQPGTSLP IGGLSYVKGA DTPPLSELTV PALLANTAAL HGSRPAVVFR EQNIRWTWNE 
FSAEVDRMAS GLHALGLRKG DRVGIWSPNR FEWLLTQFAT ARVGLVMVNI NPAYRLAELE
YALNKVGCKA IIAPEAFKTS RYLDMLATLA PELAKAEPGA LNAARLPLLR WVIRMEDVPT
PGMLTFRELL ARGANVPKTE LDEITAGLDA RDPINIQFTS GTTGAPKGAT LTHRNIVNNG
RSIAGAMRFS EQDKLCIPVP FYHCFGMVLG VLACVSTGAS MVFPGEAFHP GATMAAVSEE
RCTALHGVPT MFIAQLDDPD FSKYDFSSLR TGIMAGAPCP VEVMKRVMAD MHLAEITIAY
GMTETSPVSF QSATDDPIDK RVSTVGRVQP HLECKVVDVD GQTLPIGATG ELCTRGYSVM
LGYWDDEERT REAIRDGWMH TGDLATIDEE GYCNIVGRVK DMLIRGGENV YPREIEEFLF
RHPKVQSVQV FGVPDEKYGE EVCAWIVLKP GQSATDEEIR NYCRDQIAHY KIPRYIRFVD
EMPMTITGKV QKFVMRDQMT QELGISPKAK