Gene Rmet_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0580 
Symbol 
ID4037369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp621745 
End bp622494 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID637975955 
Productparaquat-inducible protein A 
Protein accessionYP_582735 
Protein GI94309525 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0166734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG ACCAGATCGC GCGGTCACGG CGCGTGGCCG CCGATGTGAT GGCGGAGCTG 
ACCGACGACG ACGAACGCAC CCCGCTGGCA GAGGTACCCA CCGCATCCTC ACGCGGGTTG
CTGTCGTGCC ATGCATGCGA CCTGGTGAGC CCCATCACGC TCGAAGGCGA ACCGTGCCCA
CGCTGCGGCG CCACGCTACA CCGCCGCAAG CCGGCCAGCC TGGCGCGCAC CTGGGCCTTC
CTGCTGGCCG CGTACATCCT CTACATCCCG GCCAACCTGC TACCGGTGAT GGTCACCGAG
TCGATCCTGG GCGTGCAGCG CGACACCATC CTGTCCGGTG TGCTCTATCT GTGGCTATCC
GGATCGCACA TGCTGGCTGG CGTGGTGCTG ATCGCGAGTA TCGTCGTGCC GCTGCTGAAG
ATGATGATCC TGACGCTGCT GCTGATCTCG GTGCACATGA AATCTACATG GCGCATCCGC
CAGCAGACCA AGCTGTACGG GCTGGTCGAA GTCATCGGCC GCTGGTCGAT GCTTGATATC
TTCGTGGTGG CGCTGCTGGC CTCGCTGGTG CGCGCGGGCG CGCTAGCCAC GATCATCCCC
GGCGCCGGCG CGCTGGCATT TGCCTCGGTG GTCGTGATGA CCATGCTGGC ATCGCTGAGC
TTCGACCCGC GCCTACTTTG GGACTCGCTC GAGACCCCGA ACCCCTCTTC CATCGAATTG
CCGGAATCCG ACAATGCCCG ATCACGATAG
 
Protein sequence
MARDQIARSR RVAADVMAEL TDDDERTPLA EVPTASSRGL LSCHACDLVS PITLEGEPCP 
RCGATLHRRK PASLARTWAF LLAAYILYIP ANLLPVMVTE SILGVQRDTI LSGVLYLWLS
GSHMLAGVVL IASIVVPLLK MMILTLLLIS VHMKSTWRIR QQTKLYGLVE VIGRWSMLDI
FVVALLASLV RAGALATIIP GAGALAFASV VVMTMLASLS FDPRLLWDSL ETPNPSSIEL
PESDNARSR