| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0555 |
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| Symbol | |
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| ID | 4037344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 593044 |
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| End bp | 595917 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975930 |
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| Product | formate dehydrogenase subunit alpha |
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| Protein accession | YP_582710 |
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| Protein GI | 94309500 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.185124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.358497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGCTC GAGACGATTT CGACTACGGT ACCCCGGCCA GCGACGCCGA AACGCAGGTT
ACGCTGGAAA TCGACGGGGT ATCCGTCACC GTGCCAGCCG GCACCTCCGT GATGCGCGCC
GCCGCCGAGG CGGGCGTGGG CGTGCCGAAG CTCTGCGCCA CCGATTCGCT GAAGGCATTC
GGATCGTGCC GCCTGTGCCT GGTGGAGATC GAAGGCCGGC GCGGCTACCC GGCTTCTTGC
ACCACGCCCG TTGAAGCGGG TATGAAGGTG CGCACGCAAA GCGAAAAGCT CGGCGATCTG
CGCCGTGGCG TGATGGAGCT CTATATCTCC GATCACCCGC TCGATTGCCT GACCTGCCCG
ACCAACGGCA ACTGCGAGTT GCAGGACATG GCCGGCGTGG TGGGCCTGCG CGAAGTGCGA
TACAACGATG GCGCCGGCAC TGCCCCGCCG ATCGCCACGC ACACGCATCT GGCCAAGGAT
GAATCGAATC CGTACTTCAC GTATGACCCA TCCAAGTGCA TCGTCTGCAA TCGCTGCGTG
CGTGCCTGCG AGGAGACGCA AGGCACGTTC GCGCTGACGA TCAGCGGCCG GGGCTTTGAT
TCGCGTGTGG CGGCCGGCAC CAGCCAGCCG TTCATGGAAT CGGACTGCGT GTCGTGTGGC
GCCTGCGTCC AGGCGTGTCC CACCGCCACG CTGACGGAAA CGTCGGTGAT CCAGCTGGGC
CAGGCGTCCC ACAGCAAGAT CACCACGTGC GCGTACTGCG GCGTGGGATG CTCGTTCAAG
GCCGAGATGA AGGGCAACGA GGTCGTGCGG ATGGTGCCGT ACAAGGACGG CGCCGCCAAC
GAGGGTCATG CCTGCGTGAA GGGCCGCTTC GCGTGGGGCT ATGCCACGCA CAAGGACCGC
ATCCTGAAGC CGATGATTCG CGCCAGGATC ACCGACCCGT GGAGGGAAGT GTCGTGGGAG
GAGGCGATCG GATACGCGGC GTCGCAGTTC CGACGCATCC AGGCCGAGCA CGGCAAGGAT
TCGATTGGCG GTATCGTTTC GTCGCGCTGC ACCAACGAGG AAGGCTATCT GGTGCAGAAG
CTCGTGCGAG CCGCATTCGG CAACAACAAC GTCGACACCT GCGCGCGTGT CTGCCATTCC
CCCACCGGCT ACGGCCTGAA GACGACCATC GGTGAATCCG CCGGCACGCA GACGTTCCGC
TCGGTGGCCA AGGCCGACGT GATCATGGTC ATCGGCGCCA ATCCGACCGA CGGGCACCCG
GTGTTCGCCT CGCGCATGAA GCGACGCCTG CGCGCCGGGG CCCGGCTGAT CGTGGTCGAT
CCGCGCCGCA TCGATCTGGT GGAATCGCCG CATATCCGCG CCGACTATCA CCTGCAATTG
CGTCCGGGCA CCAATGTGGC GGTGGTGACG TCGATCGCGC ACGTGATCGT CACGGAGGGG
CTGCTGGCCG AGCAATTCAT CGCCGAGCGT TGCGAGGACC GCGCGTTCCA GCAATGGCGA
GATTTCGTCG CGCTGCCCGA GAACTCGCCC GAGGCACTCG AAGCGGAGAC CGGTGTGCCG
GCCGAACAAC TGCGTGGCGC AGCCCGCCTC TACGCCACCG GCGGCAACGC TGCGATCTAC
TACGGTCTGG GCGTGACCGA ACATGCGCAG GGTTCGACCA CGGTAATGGC CATCGCCAAT
CTGGCCATGG CCACCGGCAA TATCGGTCGC GAAGGCGTGG GCGTCAATCC GCTGCGCGGC
CAGAACAACG TGCAGGGGTC GTGCGATATC GGCTCGTTCC CGCATGAGCT TCCGGGCTAC
CGTCATGTGT CGGACTCGAC GGTGCGTGGC AGCTTCGAGG CCGCGTGGAA TGTCGAGATC
AACCCCGAGC CCGGTCTGCG TATTCCGAAC ATGTTCGAAG CGGCGATTAC CGGATCGTTC
CGGGGTCTGT ACTGTCAGGG CGAGGACATT GTCCAGTCCG ACCCAAATAC GCAGCACGTG
GCCGAAGCGC TGTCGTCGAT GGAGTGCATC GTCGTGCAGG ATATCTTCCT GAACGAAACC
GCCAAGTACG CACACGTGTT CCTGCCGGGT TCGTCGTTCC TGGAGAAGGA CGGCACGTTC
ACCAACGCGG AGCGCCGGAT CTCGCGCGTG CGCAAGGTGA TGCCGCCGAA GGCCGGATAC
TCGGACTGGG AGGCAACGAT CCTGCTGTCG AACGCGCTCG GTTATCCGAT GCACTACAAC
CATCCGTCCG AGATCATGGA CGAGATTGCG CGCCTCACAC CCACGTTTGC GGGTGTCAGC
TACAAGAAGC TTGAGGAACT TGGCAGCATC CAGTGGCCGT GTAATGCCGA GGCCCCGGAG
GGCACGCCGA CCATGCACGT GGACACTTTC GTGCGCGGCA AGGGCAAGTT CATCATCACG
AAGTACGTGC CGACCAGCGA AAAGGTCAAC CGAAAGTACC CGCTGATCCT GACCACGGGG
CGCATCCTGT CCCAATACAA CGTTGGCGCG CAGACACGGC GCACGCACAA CGTGCATTGG
CACGATGAGG ACCGCCTCGA GATCCATCCG CACGATGCGG AGGAACGCGG GATCAAGGAC
GGCGACTGGG TCGGGATTCA GAGCCGTGCC GGTGAAACGG TGCTGCGAGC GATCGTCAGC
GAGCGGATGC AGCCCGGCGT GGTCTATACG ACGTTCCACT TCCCCGAGTC CGGCGCCAAC
GTGATCACGA CCGACAACTC GGACTGGGCC ACTAATTGCC CGGAGTACAA GGTGACGGCC
GTGCAGGTGA TGCCGGTGGC GCAGCCCTCC ACGTGGCAGC GCAACTACCA TGCCTTCAAC
GAGGAACAGC TGGCACATCT GCGCGCGGCC GGCGAACCCA CACCGACGCG ATGA
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| Protein sequence | MNARDDFDYG TPASDAETQV TLEIDGVSVT VPAGTSVMRA AAEAGVGVPK LCATDSLKAF
GSCRLCLVEI EGRRGYPASC TTPVEAGMKV RTQSEKLGDL RRGVMELYIS DHPLDCLTCP
TNGNCELQDM AGVVGLREVR YNDGAGTAPP IATHTHLAKD ESNPYFTYDP SKCIVCNRCV
RACEETQGTF ALTISGRGFD SRVAAGTSQP FMESDCVSCG ACVQACPTAT LTETSVIQLG
QASHSKITTC AYCGVGCSFK AEMKGNEVVR MVPYKDGAAN EGHACVKGRF AWGYATHKDR
ILKPMIRARI TDPWREVSWE EAIGYAASQF RRIQAEHGKD SIGGIVSSRC TNEEGYLVQK
LVRAAFGNNN VDTCARVCHS PTGYGLKTTI GESAGTQTFR SVAKADVIMV IGANPTDGHP
VFASRMKRRL RAGARLIVVD PRRIDLVESP HIRADYHLQL RPGTNVAVVT SIAHVIVTEG
LLAEQFIAER CEDRAFQQWR DFVALPENSP EALEAETGVP AEQLRGAARL YATGGNAAIY
YGLGVTEHAQ GSTTVMAIAN LAMATGNIGR EGVGVNPLRG QNNVQGSCDI GSFPHELPGY
RHVSDSTVRG SFEAAWNVEI NPEPGLRIPN MFEAAITGSF RGLYCQGEDI VQSDPNTQHV
AEALSSMECI VVQDIFLNET AKYAHVFLPG SSFLEKDGTF TNAERRISRV RKVMPPKAGY
SDWEATILLS NALGYPMHYN HPSEIMDEIA RLTPTFAGVS YKKLEELGSI QWPCNAEAPE
GTPTMHVDTF VRGKGKFIIT KYVPTSEKVN RKYPLILTTG RILSQYNVGA QTRRTHNVHW
HDEDRLEIHP HDAEERGIKD GDWVGIQSRA GETVLRAIVS ERMQPGVVYT TFHFPESGAN
VITTDNSDWA TNCPEYKVTA VQVMPVAQPS TWQRNYHAFN EEQLAHLRAA GEPTPTR
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