Gene Rmet_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0537 
Symbol 
ID4037326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp571191 
End bp571811 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID637975912 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_582692 
Protein GI94309482 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000013307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000588107 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGTTTTCCA TCATTCAAGC GGCCGGCTGG CCGATCTGGC CGTTGCTGCT CGCGTCGGTC 
ATCGCACTGG CGCTGATCGT CGAGCGGTTC ATTTCCCTGA AGCGCAGCAA GATCCTGCCG
CCCAAGCTGT ACGAGGAGGC GCTCTCCGCC GCCCAGCAGC GCAGGGCGAC GCCCGAGGTT
GTGAACAACC TTGAGCAGAA CTCGCCGCTT GGCCGCGTGC TGGCCGCCGG CCTGCGCCAC
GTGGTGCTGC AACCGCAGAC GTCGCGCGAC GCCGCCAAGG ACGTGGTCGA GGAAGCCGGC
CGCGTGGTCG CGCACGAACT CGAGCGCTAC CTGAACGCAT TGGGCACGAT CGCCTCGGTG
GCCCCGCTGA TGGGCCTGCT CGGCACGGTC ATCGGCATGA TCGAGATCTT CGGCAACCAG
GGCGGCACCG GTGCCAATCC GGAGCAGCTC GCGCACGGGA TCTCGGTGGC GCTGTACAAC
ACCGCGTTCG GCCTGATCGT CGCCATCCCG GCGCTGATTT TCTGGCGCTA TTTCCGCCGC
CGCGTGGACG ACTACGTGGC CGAGCTGGAA TTCCGCGCGA CCTCGTTCCT CGACGCCATC
CTGCCCCAGC GGCGGGTGTA A
 
Protein sequence
MFSIIQAAGW PIWPLLLASV IALALIVERF ISLKRSKILP PKLYEEALSA AQQRRATPEV 
VNNLEQNSPL GRVLAAGLRH VVLQPQTSRD AAKDVVEEAG RVVAHELERY LNALGTIASV
APLMGLLGTV IGMIEIFGNQ GGTGANPEQL AHGISVALYN TAFGLIVAIP ALIFWRYFRR
RVDDYVAELE FRATSFLDAI LPQRRV