Gene Rmet_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0536 
Symbol 
ID4037325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp570742 
End bp571173 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637975911 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_582691 
Protein GI94309481 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000196939 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000905807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTCC GTTCCCGTCA GCGACGCGAG GAGCCGGAGA TCAACCTGAT CCCGCTCATC 
GACGTGTTGC TCGTGATCCT CATCTTCCTG ATGATCACGA CCACGTATTC GCGCTTCACC
GAACTTCAGA TTCAGTTGCC GACGGCCGAT GCCGAGCGGG CGCAGCAGCG CCCGACCGAG
ATCGTCGTGT CCGTTTCGGC GCGCGGGATC TATTCCGTCA ACAAGCAGGT GCTGGAGCAG
ACGGATGTCA CCAGCCTCGC CGACCAGTTG CGTAGCGCAG CCGGTCCGGC CAGCAACGGG
CAACCGCCAG TGGTCATCGT CAACGCCGAT GCCCAGGCCA CTCACCAGGC CGTGATCAAT
GTGATGGAGG CCGCGCGCCT TGCAGGTTTG TCGCGGCTGA CGTTCGCCAC CCAGAGCAGT
CAGAAGCGAT AA
 
Protein sequence
MHFRSRQRRE EPEINLIPLI DVLLVILIFL MITTTYSRFT ELQIQLPTAD AERAQQRPTE 
IVVSVSARGI YSVNKQVLEQ TDVTSLADQL RSAAGPASNG QPPVVIVNAD AQATHQAVIN
VMEAARLAGL SRLTFATQSS QKR