| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0531 |
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| Symbol | |
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| ID | 4037320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 566573 |
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| End bp | 567331 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637975906 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_582686 |
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| Protein GI | 94309476 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0151424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000559523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATTC AGGGCAACGT ATTCATTGTC ACGGGCGGCG CATCCGGGCT CGGCGCGGGC
ACGGCGCGCA TGCTGGCGGC TGCGGGCGGC AAGGTCGTGA TTGCCGACCT CAACGAAGCC
GCGGGCACGG CGCTGGCCAC GGAGCTCGGC GGGCAGTTCG TCAAATGCGA CGTGGCGTCG
GAGGCCGACG GTCAGGCGGC CGTGGATGCC GCGCGGAAGC TTGGCCGGCT CTCCGGGCTG
GTCAACTGCG CGGGTATCGC CGTGGCCGCC AAGACGGTCG GCAAGAACGG ACCGCATCCG
CTCGATGCGT TCGAGAAGAC CATCCGCGTC AACCTGATCG GCACCTTCAA CATGATTCGC
CTCGCCGCCG CGGAGATGGT CCAGAACACT CCCGATGCCG AAGGCGAACG CGGCGTGATC
ATCAATACGG CCTCGGTGGC CGCGTTCGAT GGCCAGATCG GCCAGGCTGC GTATGCGGCA
TCGAAGGGCG GCGTGGTGGG CATGACGCTG GCCATCGCGC GCGATCTTTC CCGCGACGGC
GTGCGCTGCC TGACCATCGC CCCGGGGTTG TTCGAAACAC CGATGCTGCT CGGGATGCCG
CCAGAGGTGC AAGAGGCGCT CGGCAAGATG GTGCCGTTCC CGCCGCGCCT GGGCCGCCCC
GCGGAGTACG CCAAGCTGGT CCAGTCGATC ATCGGCAATA CGATGTTGAA TGGCGAAGTG
ATCCGCCTGG ATGGTGCAAT CCGCATGCAG CCGAAGTAA
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| Protein sequence | MDIQGNVFIV TGGASGLGAG TARMLAAAGG KVVIADLNEA AGTALATELG GQFVKCDVAS
EADGQAAVDA ARKLGRLSGL VNCAGIAVAA KTVGKNGPHP LDAFEKTIRV NLIGTFNMIR
LAAAEMVQNT PDAEGERGVI INTASVAAFD GQIGQAAYAA SKGGVVGMTL AIARDLSRDG
VRCLTIAPGL FETPMLLGMP PEVQEALGKM VPFPPRLGRP AEYAKLVQSI IGNTMLNGEV
IRLDGAIRMQ PK
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