Gene Rmet_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0528 
Symbol 
ID4037317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp563893 
End bp564798 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID637975903 
ProductLysR family transcriptional regulator 
Protein accessionYP_582683 
Protein GI94309473 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.54001e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTACA CACTGCGGCA GTTGCGGGTC TTTCTGGCGG TGGCGGGGCA TGGCAGTTTC 
AGCCGGGCAG CGGATGCCGT CGGGCTGACG CAGCCGGCGG TCAGTCGGGG TGTTGCCGAG
CTTGAAGAGG CACTTGGCGT ACGTCTGCTG GATCGTACGA CTCGGGAAGT CGTGCTGACG
GAGGCTGGAA CGGCACTGGT ACCAGCGCTG GAGCGGCTGC TGGGCCAGCT TGACGACACC
CTGGAAGAGA CACGGCAGTC CGGCGAACGC TATCGCGGCC GGGTTGTGAT AGCCAGTGCG
CCGACGATCT CGGCGCGACT AATGCCGATG TATGTGGCGG CCTGCGCGAG CCAGTATCCC
GATATCCGGT TGTTCGTGCG CGACAACGTC CAGGCCGACG GCCTCGAGCA GATCCGCGCC
GGCGCGGTCG ATTTCGGGGT GTTGATCGAT CCGATGGCGC GCGAGGGGCT GACTATCGCG
CCGCTCGCCA CCGATCCGTT CTGTTTCGTA TGTCGGCGCG ACCATCCACT GGCCGAGGCG
GATTCGGTGC CCTGGACCGC GTTGCACGGC GAGCGCCTGG TGCTGCTCGA TTTTGCCTCC
GGCAGCCGGC CGTTGATCGA CCGGATCTTC GCTCGTCATG GCGCGGTGCC GCAGGTGGTG
CAGGAACTCG GGCACTCCGC CAGCGTATTC GGCATGGTGG AGGCGGGGAT CGGCGCGTCG
GTCCTGCCGT CCTTCTCGTT GCCGTTGCCC GAGGCGTCCC CGCTGGTCTC GAAGCCGCTG
ACGCCGCGCG AGGAACGCAG CATCGTCATG GTCCGTCGCG AGGACCGGTC GCTGTCACCG
GCGGCGGCTG CGGTCTGGAA CATGGTCCAG ACCATGCCGA TCCCGGCCGA AACCGCGACC
GGCTGA
 
Protein sequence
MNYTLRQLRV FLAVAGHGSF SRAADAVGLT QPAVSRGVAE LEEALGVRLL DRTTREVVLT 
EAGTALVPAL ERLLGQLDDT LEETRQSGER YRGRVVIASA PTISARLMPM YVAACASQYP
DIRLFVRDNV QADGLEQIRA GAVDFGVLID PMAREGLTIA PLATDPFCFV CRRDHPLAEA
DSVPWTALHG ERLVLLDFAS GSRPLIDRIF ARHGAVPQVV QELGHSASVF GMVEAGIGAS
VLPSFSLPLP EASPLVSKPL TPREERSIVM VRREDRSLSP AAAAVWNMVQ TMPIPAETAT
G