| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0511 |
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| Symbol | |
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| ID | 4037300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 542098 |
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| End bp | 543591 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637975886 |
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| Product | RND efflux system outer membrane lipoprotein NodT |
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| Protein accession | YP_582666 |
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| Protein GI | 94309456 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.310056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA TTGCCATGTC TCGAAGCCAA TTCTCGTTCA CCGTCGTCGC GCTGGCTTGT
GCGCTGCTGA CCGGTTGTGC GGTCGGCCCT GATTACCAGC GGCCCGATGC GCCCGTGCCC
AAGGCCTTCA AGGAAGCCAG CGAGGACATG CCCGCATGGA CCGGCGACTG GAAAACCGCC
GAGCCGCAGG ACATCATGGC GCGCCCCGAC TGGTGGCGCG TGTTCGACGA TCCCGTGCTC
GACGCGCTGA TGTCTCAGGT CAAGATCTCG AACCAGAACA TCAAGGCGGC GGAAGCACAG
TATCGCCAAG CCACGGCATC GCTGTCTGCG GCACGCGCGG GCTACTTCCC GACGGTCGGC
GCCAATGCCG GCGTATCGCG CGGCGCCACG AGCAGCAATG GCCAGATCAT CAACGGCCAG
AACCTGACGC TGTCCGCCAA CTGGGAAATC GACGTGTGGG GCCGCGTGCG CAGGCAGGTG
GAAAGCGCCC AGGCCGGCGC GCAGGCGAGC GAGGCCGACC TGGCTTCGAT CCTGCTCTCC
ACGCAGGCAA CGCTGGCGCA GAGCTACTTC CTGCTGCGCG TGGCAGACGC CCAGCACGCG
CTGCTGGACC GCACCGTGGC CGACTACGCG AAGTCGCTGC AGCTCGTGCA GAACCAGTAC
AAGGCGGGCA CCGCGCAACG CTCGGACGTG CTGCAGTCGG AAACCCAGCT CAAGTCCGCG
CAAGCACAGC AACTCGATAT CCAGATCACG CGGCAGCAGC TTGAACATGC CATCGCGGTA
CTGGTCGGCA AACCCCCGGC GGACCTGACC GTGGCGACCG TCGACAACCG CGACGCGATT
CCGCGCGTAC CGGTGGCCGT GCCGTCGCAG TTGCTGGAAC GCCGCCCCGA TATCTCGGCT
GCGGAACGGC GCATGGCATC TGCGAACGCC AATATTGGCG TGGCGGAGGC GGCCTACTAC
CCAACGCTCT CGCTATCGGC CACAGGCGGG CTGACGGCCA GCACCCTGGC GCGCTGGCTC
TCCCTGCCCG ACCGCGTCTG GTCAATCGGT GCTGGTCTGG CCGGCACCGT GTTCGACGGC
GGCCTGCGCC GTGCCAATAC AGCGATTGCC GTGGCCCAAT ACGACCAGAC CGTGGCGAAC
TATCGGCAGA CCGTGCTGGG CGCGTTCCAG GAGGTCGAGG ACAACCTCGC CTCGGCCCGC
GTGCTCGAAC AGGAGTCGAT CGTCCAGAAC GACGCGCTGC GCTCGGCACG TGAAGCGCTT
TCGCTGGTCA ACAACCGCTA CAAGGCCGGC ACCGCAGCGT TGCTGGATGT GCTGACGGCA
CAGACCGCGG CCTATACGGC GGAGAACACC ACATTGACGA TCATGGGGCG GCAGTACACA
GCGGCCATCA CGCTGATCAA GGCGCTTGGC GGCGGATGGC ATGGGCAGGC TATGGAGGTG
GGGAAGGTCG ATAGCACCGC GCCAGCTACC GCGCCTGCAT CGACGGCGCA GTAA
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| Protein sequence | MKAIAMSRSQ FSFTVVALAC ALLTGCAVGP DYQRPDAPVP KAFKEASEDM PAWTGDWKTA
EPQDIMARPD WWRVFDDPVL DALMSQVKIS NQNIKAAEAQ YRQATASLSA ARAGYFPTVG
ANAGVSRGAT SSNGQIINGQ NLTLSANWEI DVWGRVRRQV ESAQAGAQAS EADLASILLS
TQATLAQSYF LLRVADAQHA LLDRTVADYA KSLQLVQNQY KAGTAQRSDV LQSETQLKSA
QAQQLDIQIT RQQLEHAIAV LVGKPPADLT VATVDNRDAI PRVPVAVPSQ LLERRPDISA
AERRMASANA NIGVAEAAYY PTLSLSATGG LTASTLARWL SLPDRVWSIG AGLAGTVFDG
GLRRANTAIA VAQYDQTVAN YRQTVLGAFQ EVEDNLASAR VLEQESIVQN DALRSAREAL
SLVNNRYKAG TAALLDVLTA QTAAYTAENT TLTIMGRQYT AAITLIKALG GGWHGQAMEV
GKVDSTAPAT APASTAQ
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