| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0500 |
|---|
| Symbol | |
|---|
| ID | 4037289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 529627 |
|---|
| End bp | 530679 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637975875 |
|---|
| Product | regulatory protein, LuxR |
|---|
| Protein accession | YP_582655 |
|---|
| Protein GI | 94309445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAG CGACCATGCA TGGCGCGATC CGGGGGCTTT ACGAGGGCAT CCTGGACCCG
GCAGCCTGGC AGCAAAGTCT GCGTGCGTTA ACGGCAATAG CCGGCACGAC GCACGCCTCC
ATGATGGTAT GGGACACGGT CCGCGACCAG GTGACCGTCA ACGAGGTGGT CAACCCGGTC
GAGGAATTGT TTCTCGCCTA TGAAAACGAT TTCCAGGCCA TGGACCCGGC CAAGGCGTTC
GCACCCAGGC TGGTGCCCGG CGCCTGGTAT GTCGATGCGC GCGACCTGGG CCATCAGGCC
ATGGCGCGTC ATCCGTTCTA TGGCGAGTTC TTCCACAAGT TCGAATTGGG TTCATACATG
GCCTGCCTGG TAGAGCGCCA GCCGCACTAC GAGGTTTACT TCTCGATGCA GCGCTCGCTG
GCGCAGGGCA ACTTCAGCGG CGATGACGCG CAGCGGCTCG ATTGGGTGGT ACCGCACATG
CGCAGCGCGA TCGCGATCCG CGACCGCACG CTGGCGCTGT CGACGATGAC CACGCTGGCG
ACGCGGCTGA TCGAACGACT GGCATTCGCC GTGGCCGTCT ATTCGCCCGA CCGGCGGCTG
CTGCTGGCCA ATACGGCTGG TGAACGCTGG GCACGCCGGC TCGACCCGTT GGGCAAGACC
ACCGAGTGGC AGCTTTCGCG CAGCTTCATG GAGATGCTGC ACGGCGCCTG CGATCCCGCA
AAACCGCAGG CCGCCATGGC GGCCCGCGCC ACCGGCCCGA ATGGCAGCCA GGCCGAAGTG
CTGGTGCTGC CCCTGCCGGC CAGCCACGCC TTTGCCTCGA CATGGCAGAC GCCCGCGGCG
CTGGTTGTCG TGCATGAGGC GGGCGCCCCG TCGGTGCTGC TCGACTCGGT CATGCGCAAC
CTGTACGGCC TGACACCCGC CGAGACCCGG TTGGTCGCGC GGCTGGCCAC GGGCGAAGGG
TTGCCCGAAG CCAGCCGGCA GATGCGCATC CGGCACGAGA CCGCGCGCAC CCAGCTCAAG
GCGATCTTCC TCAAGACCGG CTGCACCAGC TAG
|
|---|
| Protein sequence | MDQATMHGAI RGLYEGILDP AAWQQSLRAL TAIAGTTHAS MMVWDTVRDQ VTVNEVVNPV
EELFLAYEND FQAMDPAKAF APRLVPGAWY VDARDLGHQA MARHPFYGEF FHKFELGSYM
ACLVERQPHY EVYFSMQRSL AQGNFSGDDA QRLDWVVPHM RSAIAIRDRT LALSTMTTLA
TRLIERLAFA VAVYSPDRRL LLANTAGERW ARRLDPLGKT TEWQLSRSFM EMLHGACDPA
KPQAAMAARA TGPNGSQAEV LVLPLPASHA FASTWQTPAA LVVVHEAGAP SVLLDSVMRN
LYGLTPAETR LVARLATGEG LPEASRQMRI RHETARTQLK AIFLKTGCTS
|
|---|
| |