| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0489 |
|---|
| Symbol | |
|---|
| ID | 4037278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 517074 |
|---|
| End bp | 518111 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637975864 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_582644 |
|---|
| Protein GI | 94309434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.662997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCG GCGAAGCCTT TCAAACGCCA TGGTGGCTGC GCGGTGGCCA CGCGCAGACG
ATCCTGCCGG CACGCTTCAC GCGCCACCGG CGCATCGTGT TCCGGCGCGA ACGCTGGGAC
ACCCCCGACG GCGACTTCAT CGACCTGGAC TGGACCACCC ACCCGACCAC CCCGGGCGCG
CCGCTGGTGG TGATGTTCCA CGGTCTCGAA GGCGATTCGC GCAGCCACTA CGCGCAAACG
CTGATGGCCG CGCTGCGCGA GCGCGGCTGG CAAGGCGTGA TCCCGCACTT CCGGGGCTGC
TCGGGTGAAC TGAACATCGC GCCGCGCTTC TACCATTCGG GCGACTCGGC CGAGATCCGC
TGGGTGCTGG AACGCGTGCG GAATCAGGTC CACACGGTGC AACCGGGACG ACAGATGCTG
GCCGTGGGCA TCTCGCTGGG CGGCAATGCG CTGCTGCGTT ATCTGGGCGA GGAAGGCAGC
GGAGCGAACT TCCTTTCCGC CGCCGCGTCC GTCTCGGCAC CGCTGGATCT GGCCGCCGGC
GGCGCGGCGC TGTCCAGTGG CTTCAACATG ATCTACACGC GCATGTTCCT GCAGACGCTC
AAGCGCAAGT CGCTGGCGAA GCTGGAACAG TTTCCAGGTC TGTACGATCG GGAAACGATG
CTCGGCAGCC GCGATCTCTA TGCGTTCGAC AACGTCGTGA CCGCGCCTCT GCACGGCTTT
CGCGACACGG ACGATTACTG GGCGCGCGCA TCGAGCAAAC CGATCCTCGG CGAGATCCGC
GTCCCGACGC TAGTCCTCAA CGCCCGCAAC GATCCGTTCC TGCCCGCCCG GCATCTGCCG
GGCCCACGCG AGGTCAGCGC CGACGTGCTG CTGGAACAGC CCGAGCACGG CGGCCACGTC
GGCTTCATGA CGCCACGCGA GGGTCTGCTG GGCCAGTTGC CGCTGCTACC CTTCGCGGGC
CATATCGAAT GGCTGCCCAC ACGCATCCTT GATTATTTCG ACAGCGTGCG CGCGACCCAA
GCAACACCAG CCACCTGA
|
|---|
| Protein sequence | MLFGEAFQTP WWLRGGHAQT ILPARFTRHR RIVFRRERWD TPDGDFIDLD WTTHPTTPGA
PLVVMFHGLE GDSRSHYAQT LMAALRERGW QGVIPHFRGC SGELNIAPRF YHSGDSAEIR
WVLERVRNQV HTVQPGRQML AVGISLGGNA LLRYLGEEGS GANFLSAAAS VSAPLDLAAG
GAALSSGFNM IYTRMFLQTL KRKSLAKLEQ FPGLYDRETM LGSRDLYAFD NVVTAPLHGF
RDTDDYWARA SSKPILGEIR VPTLVLNARN DPFLPARHLP GPREVSADVL LEQPEHGGHV
GFMTPREGLL GQLPLLPFAG HIEWLPTRIL DYFDSVRATQ ATPAT
|
|---|
| |