| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0446 |
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| Symbol | glyS |
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| ID | 4037234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 471716 |
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| End bp | 473839 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637975820 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_582601 |
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| Protein GI | 94309391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC CCATGACCGA TTCGCTGCTG ATCGAACTGT TCACTGAAGA ACTGCCGCCG
AAGGCGCTGG CACGCCTGGG CGAGGCCTTT GCCCAAGGCC TGTTCGACGG CCTCGGCGCG
CGCGATCTGC TCGAAGCAGG CGCCACCGTT ACGCCTTTCG CCACGCCGCG CCGCCTGGGC
GCGCTGGTCT CCGGCGTGCG CCGCACCGCG CCGGACCGCG AGCAGCGCGA GAAGGTACTG
CCGCTGACCG TGGCGCTCGA TGCCAACGGC GCCCCGACGG CTCCGCTGGG CAAGAAGCTG
GCGGCACTGG CCAAATCGGT CGGCGTAGCC GAGATTGACT GGCAGACGCT CGAGCGCGCC
TCCGACGGCA AGGCCGATGC GTTCTTCTAC CGCTACACCG CGCGCGGCGC GACGCTGGCC
GATGGCCTGC AGGCAGCGCT CGACGAGACG CTGACCAAGC TGCCGATCCC GAAGGTGATG
AGCTACCAGC GTCCGGACGG CACCACCGTG CATTTCGTGC GTCCGGCACA CAGCCTGATC
GCGCTGTACG GCGCGGAGAT CGTGCCGGTT TCGGCGCTCG GCCTGCAAGC CAGCAATCTC
ACGCAAGGTC ACCGCTTCCT GTCGCAGGGC ACGATCGAGA TTCCCCACGC GGCCGAGTAC
GCCGGCCTGC TGGAATCGCG CGGCCGCGTC GTCGCCAGCT ATGCCGACCG GCGCGAGCGC
ATCCGCACGG CGCTGCTCAA GGAAGCCGGC GCCGACAAGG TCATCATGCC GGACTCGCTG
CTTGACGAGG TGAACTCGCT GGTCGAATGG CCGGTGATCT ACCCGTGCCA CTTCGAGGAA
GCCTTCCTGG CCGTGCCGCA GGAGTGCCTG ATCCTGACGA TGCAGACCAA CCAGAAGTAC
TTTGCACTGA CCGATGCCGA AGGGCACCTG CGCAACCGCT TCCTGATCGT ATCGAACCTG
GCCACCGACA CCCCGCAATC GATCATCACG GGCAACGAGC GTGTGGTGCG CCCACGCCTG
GCCGATGCGA AGTTCTTCTT CGACCAGGAC CGCAAAAAGA CGCTGGCCTC GCGCGTGCCG
CAACTCGCCA ACGTGGTCTA CCACAACAAG ATCGGCAACC AGCTCGACCG CGTGCAGCGC
CTGCAGCAGA TCGCCGGCCA TCTTGCCGAC GCGATGAACG CCACCGGCGC CCCGGTCGAC
AAGGCCGCCG CGATGCGCGG CGCCGAACTG GCCAAGGCCG ACCTGCTGAC CGATATGGTC
GGCGAGTTCC CCGAGCTGCA AGGCACGATG GGCACGTACT ACGCCCGCCA CGACGACGAA
GCCGAGGACG TCGCCCTGGC CTGCTCCGAA CACTATCGCC CGCGCTTTGC CGGCGACGCG
CTGCCGGCAG GCAACGTGAG CACCGCCGTG GCGCTGGCCG ACAAGCTTGA GACGCTGATT
GGCATCTGGG GCATCGGCCT GCAGCCGACG GGCGAAAAGG ACCCGTTCGC GCTGCGCCGC
CACGCGCTGG GCATCCTGCG GATGCTGATC GAGAAACCGC TGGCGCTGCC CCTGAACGAC
GTGCTGGGTC TGACCGAACA AGCCTTCGCC GGCATCGCGG CGGTCAAGCC TTCGCGCGAA
GCGATCACCG ACTTCCTCTT CGACCGCGTA CGTGGCTACC TGAAGGACAA GGGCTACACG
ACCAACGAAG TAGAAGCCGT GGTCAGCCTG CGCCCGCAGC AACTGCACGA CATCCTGGCG
CGCATGGAAG CCGTCCGCAC GTTCGCGGCG TTGCCTGAAG CCGAAGCCCT GGCCGCAGCG
AACAAACGCA TCACGAACAT CCTGAAGAAG ACGGACGAGG CAATCGGCAG CGTCGATGTA
TCGCTGTTCC AGGAGGCTGC CGAAGGCGCG TTGCACGAGG CGATCGAGCG CGTGCGCCCG
GGCGTGGAAG CCGCGTTCGC GGGTGGTGAT TTCACCGCCG CGCTGCGCGA CCTGGCACAG
CTTCGCGATG CTGTGGACCG CTTCTTCAAC GACGTGATGG TCATGGCCGA GGACGCGAAG
CTGCGCGCCA ACCGCCTGGC GCTGTTGGCC ACGCTGCACG GCCTGGCGAA TCGCGTCGCG
GACATTTCGA AGCTGGCGGC CTAA
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| Protein sequence | MSQPMTDSLL IELFTEELPP KALARLGEAF AQGLFDGLGA RDLLEAGATV TPFATPRRLG
ALVSGVRRTA PDREQREKVL PLTVALDANG APTAPLGKKL AALAKSVGVA EIDWQTLERA
SDGKADAFFY RYTARGATLA DGLQAALDET LTKLPIPKVM SYQRPDGTTV HFVRPAHSLI
ALYGAEIVPV SALGLQASNL TQGHRFLSQG TIEIPHAAEY AGLLESRGRV VASYADRRER
IRTALLKEAG ADKVIMPDSL LDEVNSLVEW PVIYPCHFEE AFLAVPQECL ILTMQTNQKY
FALTDAEGHL RNRFLIVSNL ATDTPQSIIT GNERVVRPRL ADAKFFFDQD RKKTLASRVP
QLANVVYHNK IGNQLDRVQR LQQIAGHLAD AMNATGAPVD KAAAMRGAEL AKADLLTDMV
GEFPELQGTM GTYYARHDDE AEDVALACSE HYRPRFAGDA LPAGNVSTAV ALADKLETLI
GIWGIGLQPT GEKDPFALRR HALGILRMLI EKPLALPLND VLGLTEQAFA GIAAVKPSRE
AITDFLFDRV RGYLKDKGYT TNEVEAVVSL RPQQLHDILA RMEAVRTFAA LPEAEALAAA
NKRITNILKK TDEAIGSVDV SLFQEAAEGA LHEAIERVRP GVEAAFAGGD FTAALRDLAQ
LRDAVDRFFN DVMVMAEDAK LRANRLALLA TLHGLANRVA DISKLAA
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