Gene Rmet_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0444 
Symbol 
ID4037232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp470308 
End bp471069 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID637975818 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_582599 
Protein GI94309389 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.57827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCC TCCGTTCCCT GCTGTTCTCG CTGTACCTCC TGGCACTCAC GCCCCCCTAT 
GCGTGCCTTT GCTTCATCGT GTTTCCGTTC ATGAATGCGG AGAACCGCTT CCGCTTCGTG
CGCGGCTGGA CAAGGCTCGT GATCTGGGCG GGCCGCCTGA TCTGCGGCAT CCACTATCGC
ATCGAGGGCA TGGAGCAGGC GCAGTCGATG CTCGACAAGC ACGTGGTGCT GCTGTCCAAG
CACCAGTCCG CATGGGAAAC CGTGGCCTAT GTGGCCCTGA TGCCCAAGCC GCTGTGTTTC
GTCTTCAAGC GCGAGTTGCT GCTAGTACCG TTCTTCGGCT GGGCCCTGGG GATGCTGAAG
ATGGTCCATA TCAATCGCAA GGACGGCCCG CGCGCGTTCG CGTCGGCCGC CCGCCAGGGC
CGCGACCGCC TGGCAGAAGG CGCCTGGATC ATCATGTTCC CGGAGGGCAC GCGCACCGCC
TCGGGCCTGG AGAAGCCGCG CTACAAGAGC GGCGGCGCCC GTCTGGCGGT GGAAACCGGC
GCATGGGTTA TCCCGATGGC TGTCAATTCG GGACGACTCT GGCCCCGCAA CTCCTTCCTG
AAATATCCGG GCATGATTAC GATTTCGATC GGCGCCCCGA TTGCGTCGGC CAACAAGACC
GCAGACATGC TGAATCAGGA AGTCGAAGCG TGGATCGAGG CAGAGATGCG CCGCATCGAT
CCGGACAGCT ATCGCCGCGC AGGAAACCAG GCCACCGCAT GA
 
Protein sequence
MTFLRSLLFS LYLLALTPPY ACLCFIVFPF MNAENRFRFV RGWTRLVIWA GRLICGIHYR 
IEGMEQAQSM LDKHVVLLSK HQSAWETVAY VALMPKPLCF VFKRELLLVP FFGWALGMLK
MVHINRKDGP RAFASAARQG RDRLAEGAWI IMFPEGTRTA SGLEKPRYKS GGARLAVETG
AWVIPMAVNS GRLWPRNSFL KYPGMITISI GAPIASANKT ADMLNQEVEA WIEAEMRRID
PDSYRRAGNQ ATA