Gene Rmet_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0417 
Symbol 
ID4037205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp442941 
End bp444182 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content63% 
IMG OID637975791 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_582572 
Protein GI94309362 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.117344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TGTCCCCGGC CGCCGCGGCC AACTATCCAC TTACGCCGTC GGTGATGCGC 
GCACTGGAGA TCACCAAGCG CGGCTGCGAC GAGCTCCTGG TTGAATCCGA ATGGTTGCAG
AAGCTGGCCC GCAGCGAGGC CACTGGCGTG CCGCTGCGGA TCAAGCTTGG CCTGGACCCG
ACCGCGCCCG ACATCCATCT GGGCCACACC GTGGTCCTGA ACAAGCTGCG CCAGCTCCAG
GATCTGGGCC ACCAGGTGAT CTTCCTGATC GGCGATTTCA CGTCGACGAT CGGCGATCCC
TCCGGCCGCA ACTCCACTCG TCCGCCGCTG ACCCGGGAGC AGATCGAGGC CAACGCCCAG
ACCTACTACC GCCAGGCCAG CCTGGTGCTC GATCCGGCAC GTACCGAAAT CCGCTACAAC
AGCGAGTGGT GTGACCCATT GGGCGCCCGC GGCATGATCC AGCTCGCGGC CAAGTACACC
GTGGCCCGGA TGATGGAGCG CGATGACTTC ACCAAACGGT TTCGGTCTGG GATTCCGATT
TCGGTCCATG AGTTCCTTTA TCCGCTCATG CAGGGCTACG ATTCCGTGGC GCTGAAGTCG
GATCTGGAGC TGGGCGGCAC CGACCAGAAG TTCAATCTGC TGGTGGGCCG CGAGCTGCAG
AAGGAGTACG GCCAGGAATC GCAGTGCATC CTGACGATGC CGCTGCTGGT GGGTCTGGAC
GGCGTTGAGA AGATGTCAAA GTCCAAGAAC AACTACATCG GCGTGACCGA GGCCCCGAAC
GACATGTTCG GCAAGCTGAT GAGCATCTCG GACGAACTGA TGTGGCAGTA CTACACGCTG
CTGTCGTTCC GCCCGATGAG CGAGATCGAC CTGATGAAGA GTGAAGTGGC ACTGGGCCGC
AACCCGCGCG ACTGCAAGGT GGCTCTGGCC CAGGAGATCG TCACGCGTTT CCACAGCCAG
GCCGATGCCG AGAAGGCGCT CGAGGACTTC AATCACCGCG CTCGTGGCGG CGTGCCCGAC
GACATCCCGG CCGTGAGCCT CGAAGGCGCG CCGCTGGGCA TTGCCCAATT GCTCAAGCAG
GCCAATCTCG TGCCGTCGAC GTCCGAGGCC AACCGCAATA TCGAGCAGGG TGGCGTGAAG
ATCGATGGCG CCGTGGTCAG CGACAAGTCG ACCAAGGTGG TCGCCGGCAC GTACGTGGTG
CAGGTGGGCA AGCGCCGCTT CGCGCGCGTG ACGCTTTCCT GA
 
Protein sequence
MSEVSPAAAA NYPLTPSVMR ALEITKRGCD ELLVESEWLQ KLARSEATGV PLRIKLGLDP 
TAPDIHLGHT VVLNKLRQLQ DLGHQVIFLI GDFTSTIGDP SGRNSTRPPL TREQIEANAQ
TYYRQASLVL DPARTEIRYN SEWCDPLGAR GMIQLAAKYT VARMMERDDF TKRFRSGIPI
SVHEFLYPLM QGYDSVALKS DLELGGTDQK FNLLVGRELQ KEYGQESQCI LTMPLLVGLD
GVEKMSKSKN NYIGVTEAPN DMFGKLMSIS DELMWQYYTL LSFRPMSEID LMKSEVALGR
NPRDCKVALA QEIVTRFHSQ ADAEKALEDF NHRARGGVPD DIPAVSLEGA PLGIAQLLKQ
ANLVPSTSEA NRNIEQGGVK IDGAVVSDKS TKVVAGTYVV QVGKRRFARV TLS