Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0402 |
Symbol | |
ID | 4037189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 429602 |
End bp | 430336 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637975776 |
Product | ABC transporter-related protein |
Protein accession | YP_582557 |
Protein GI | 94309347 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.119002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAA TCAATAACGT TTCCAAGTGG TACGGCGCCT TCCAGGTGCT GACCGACTGC ACCACCAAGG TTGCCAAGGG TGAAGTGGTG GTGGTGTGCG GTCCGTCCGG TTCGGGCAAG TCCACGCTGA TCAAGACCGT CAATGCGCTG GAGCCGTTCC AGAAGGGCGA CATCCTCGTC GACGGCACGT CGGTGGGCAA TCCGAAGACC AACCTGCCCA AACTGCGTTC GCGCGTGGGC ATGGTGTTCC AGAACTTCGA ACTGTTCCCG CACCTGTCGA TCACCGAGAA CCTGACCATC GCGCAGATGA AGGTGCTGGG CCGCTCGAAG GACGAGGCGA TGGCAAAGGG CCTGAAGTAT CTGGAGCGCG TGGGCCTGAA GAGCCAGGCG GAAAAGTACC CGGGCCAGCT TTCCGGTGGT CAGCAGCAGC GCGTGGCGAT TGCCCGCGCG CTGTCGATGG ACCCGATCTG CATGTTGTTC GACGAACCGA CCTCGGCGCT CGACCCGGAA ATGGTCAACG AGGTGCTGGA CGTGATGGTG CAGCTCGCGC AGGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCGCGC AAGGTGGCCA ACCGCGTGAT CTTCATGGAT GCCGGCAAGA TCGTGGAAGA CTGCGCGAAG GAAGAGTTCT TCGGCAACAT CGACGCCCGC TCGGACCGCG CCAAGCAGTT CCTGTCGAAG ATCCTGCACC ACTGA
|
Protein sequence | MIEINNVSKW YGAFQVLTDC TTKVAKGEVV VVCGPSGSGK STLIKTVNAL EPFQKGDILV DGTSVGNPKT NLPKLRSRVG MVFQNFELFP HLSITENLTI AQMKVLGRSK DEAMAKGLKY LERVGLKSQA EKYPGQLSGG QQQRVAIARA LSMDPICMLF DEPTSALDPE MVNEVLDVMV QLAQEGMTMM CVTHEMGFAR KVANRVIFMD AGKIVEDCAK EEFFGNIDAR SDRAKQFLSK ILHH
|
| |