Gene Rmet_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0402 
Symbol 
ID4037189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp429602 
End bp430336 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637975776 
ProductABC transporter-related protein 
Protein accessionYP_582557 
Protein GI94309347 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.119002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA TCAATAACGT TTCCAAGTGG TACGGCGCCT TCCAGGTGCT GACCGACTGC 
ACCACCAAGG TTGCCAAGGG TGAAGTGGTG GTGGTGTGCG GTCCGTCCGG TTCGGGCAAG
TCCACGCTGA TCAAGACCGT CAATGCGCTG GAGCCGTTCC AGAAGGGCGA CATCCTCGTC
GACGGCACGT CGGTGGGCAA TCCGAAGACC AACCTGCCCA AACTGCGTTC GCGCGTGGGC
ATGGTGTTCC AGAACTTCGA ACTGTTCCCG CACCTGTCGA TCACCGAGAA CCTGACCATC
GCGCAGATGA AGGTGCTGGG CCGCTCGAAG GACGAGGCGA TGGCAAAGGG CCTGAAGTAT
CTGGAGCGCG TGGGCCTGAA GAGCCAGGCG GAAAAGTACC CGGGCCAGCT TTCCGGTGGT
CAGCAGCAGC GCGTGGCGAT TGCCCGCGCG CTGTCGATGG ACCCGATCTG CATGTTGTTC
GACGAACCGA CCTCGGCGCT CGACCCGGAA ATGGTCAACG AGGTGCTGGA CGTGATGGTG
CAGCTCGCGC AGGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCGCGC
AAGGTGGCCA ACCGCGTGAT CTTCATGGAT GCCGGCAAGA TCGTGGAAGA CTGCGCGAAG
GAAGAGTTCT TCGGCAACAT CGACGCCCGC TCGGACCGCG CCAAGCAGTT CCTGTCGAAG
ATCCTGCACC ACTGA
 
Protein sequence
MIEINNVSKW YGAFQVLTDC TTKVAKGEVV VVCGPSGSGK STLIKTVNAL EPFQKGDILV 
DGTSVGNPKT NLPKLRSRVG MVFQNFELFP HLSITENLTI AQMKVLGRSK DEAMAKGLKY
LERVGLKSQA EKYPGQLSGG QQQRVAIARA LSMDPICMLF DEPTSALDPE MVNEVLDVMV
QLAQEGMTMM CVTHEMGFAR KVANRVIFMD AGKIVEDCAK EEFFGNIDAR SDRAKQFLSK
ILHH