| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0392 |
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| Symbol | |
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| ID | 4037179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 420529 |
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| End bp | 421587 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975766 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_582547 |
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| Protein GI | 94309337 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00263227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGCAAT CCCCTCTGCG CCGTCATCTG CTGAAGCTGT GCACCGCCAT GGGCACCACC
ATGGTGCTGT CGACACTCTG CGCGGGCACC GCGCAGGCGC AGACCGCGAC GAAGATCCGC
TTTCAGCTCG ACTGGCGCTT TGAAGGGCCA TCCGCGCTGT TCCTGCTTGG CGAGCAGAAG
GGCTACTACA AGGCCGAGAA GCTCGACGTG TCGATCGACG CCGGCAATGG ATCGGGCAAC
GTGGTCAATC GCGTGGCCTC CGGCACGTAC GACATGGGTT TTGCCGATCT GGCATCGGTA
ATGGAGTTCT ACGGCAACAA CCCGGACGCG AAGAACAAGC CGGTGGCCGT GATGATGGTC
TACAACAACA CGCCGGCCGC CGTGCTGGCG CTGAAGAAGT CCGGCATTCG CGCGCCGAAG
GACCTGACCG GCAAGAAGCT CGGCGCCCCG GTATTCGATG CCGGCCGCCG CGCGTTCCCG
ATCTTCGCCA AGGCCAACGG CCTGCAGGCG GCGTCGTTCA ACTGGCAGGC GATGGACCCG
ACGCTGCGCG AGACCATGCT GACGCGTGGC GATCTCGATG CGATCACCGG CTTCTCGTTC
ACGTCGATCC TGAATCTCAA TGCGCGCGGC GTGAAGGATG AGGACATCGT CGTGCTCCCC
TATCCGCAGT ACGGCGTGAA GCTGTATGGC AACGCGATCA TTGCGTCGGA GCAGTTTCTG
AAGGCCCACC CTGAAGCGGT CAAGGCCTTC CTGCGGGCGT TCGCGAAATC GGCGAAGGAC
GTGATCGCGA ACCCGGAAGA GGGGATCAAG GCCGTGAAGG CGCGCGACGG GATCATCGAC
GAGAAGCTTG AAGTTCGCCG GCTGAAGATG GCGCTCGACG CGGTGGTCAA GTCGCCCGAC
GCGAAGGCGG AGGGTTTCGG GCGCGTCAAC AAGCCGCGAC TGTCGCTGAT GGCATCCCAG
GTGGCCGACG CCTTCGCCAC GAAGGGGCGC ATCAATCCCG ATGCGCTGTG GACCGATGCC
TACCTGCCGT CGGCAGCCGA ACTGGATGTC CTGCGATGA
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| Protein sequence | MPQSPLRRHL LKLCTAMGTT MVLSTLCAGT AQAQTATKIR FQLDWRFEGP SALFLLGEQK
GYYKAEKLDV SIDAGNGSGN VVNRVASGTY DMGFADLASV MEFYGNNPDA KNKPVAVMMV
YNNTPAAVLA LKKSGIRAPK DLTGKKLGAP VFDAGRRAFP IFAKANGLQA ASFNWQAMDP
TLRETMLTRG DLDAITGFSF TSILNLNARG VKDEDIVVLP YPQYGVKLYG NAIIASEQFL
KAHPEAVKAF LRAFAKSAKD VIANPEEGIK AVKARDGIID EKLEVRRLKM ALDAVVKSPD
AKAEGFGRVN KPRLSLMASQ VADAFATKGR INPDALWTDA YLPSAAELDV LR
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