Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0387 |
Symbol | |
ID | 4037174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 414803 |
End bp | 415999 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637975761 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_582542 |
Protein GI | 94309332 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.618119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00238566 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACAAC TGCAAGACGC ATACATTGTC GCGGCTACCC GTTCGCCGAT CGGCAAGGCC CCGAAGGGCG CTTTCAAGAA CACCCGTCCC GATGACCTGC TGGCGACGAT CCTGCAAGCG GCCGTGGCCC AGGTGCCGAG CCTGGACCCC GCGCTGATCG AGGACGCCAT CGTCGGCTGC GCGATTCCCG AAGCGCAGCA GGGCCTGAAC GTGGCGCGTA TCGGCGCGCT GCTGGCAGGC CTGCCCAACA CCGTGGGCGG CATCACCGTG AACCGCTTCT GCGCGTCGGG CCTGTCGGCC GTGGCAATGG CTGCGGACCG TATCCGCGTG GGCGAATCGG ATGTAATGAT CGCCGCCGGC GTGGAGTCGA TGAGCATGGT GCCGATGATG GGCAACTCGC CGTCGATGTC GCCGTCGATC TTCGAACGCG ACGAGAATAT CGGCATTGCC TACGGCATGG GTCTGACGGC CGAGAAGGTG GCCACGCAGT GGAAGGTCAG CCGCGAGGAC CAGGATGCGT TCTCGCTGGC ATCGCACCAG AAGGCCATCG CCGCGCAGCA GGCTGGCGAA TTCAAGGACG AAATTACCCC GATTGAGGTA GTTGAGCGGT TCCCGGATCT CGCGTCTGGT CAGATCAACG TCAAGACGCG TACTATTTCG CTGGACGAGG GACCGCGTCC CGATACGTCG GTGGAAGGGC TTGGCAAGCT GCGCGCGGTG TTCGCCAACA AGGGCAGCGT GACGGCCGGC AATAGCTCGC AGACGTCCGA TGGCGCCGGC GCGCTGATCC TGGTTTCGGA GAAGATCCTC AAGCAGTTCA ACCTGGTGCC GCGGGCCCGT TTCGTATCGT TCGCGGTGCG TGGCGTGCCG CCGGAGATCA TGGGGATCGG TCCGAAGGCA GCGATTCCGG CTGCGCTGAA GGCCGCTGGC CTGACGCAGG ACCAGATCGA CTGGATCGAG CTGAACGAAG CGTTTGCCGC GCAATCGCTG GCGGTGATGC GTGACCTGGA ACTTGATCCG GCCAAGGTCA ACCGGATGGG CGGCGCCATC GCGCTGGGCC ACCCGCTCGG TGCGACCGGA GCGATCCGTT CGGCCACTGT GGTGCACGCA CTGCGTCGCC ACAACATGAA GTACGGCATG GTGACCATGT GCGTGGGCAC GGGCATGGGC GCAGCCGGAA TCTTCGAGCG CGTATAA
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Protein sequence | MKQLQDAYIV AATRSPIGKA PKGAFKNTRP DDLLATILQA AVAQVPSLDP ALIEDAIVGC AIPEAQQGLN VARIGALLAG LPNTVGGITV NRFCASGLSA VAMAADRIRV GESDVMIAAG VESMSMVPMM GNSPSMSPSI FERDENIGIA YGMGLTAEKV ATQWKVSRED QDAFSLASHQ KAIAAQQAGE FKDEITPIEV VERFPDLASG QINVKTRTIS LDEGPRPDTS VEGLGKLRAV FANKGSVTAG NSSQTSDGAG ALILVSEKIL KQFNLVPRAR FVSFAVRGVP PEIMGIGPKA AIPAALKAAG LTQDQIDWIE LNEAFAAQSL AVMRDLELDP AKVNRMGGAI ALGHPLGATG AIRSATVVHA LRRHNMKYGM VTMCVGTGMG AAGIFERV
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