| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0378 |
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| Symbol | aspS |
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| ID | 4037165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 403176 |
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| End bp | 404984 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975752 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_582533 |
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| Protein GI | 94309323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.074249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA TGCGTACTCA CTACTGCGGT CTGGTGACCG AACAACTGAT CGGCCAGGAA
GTGGCCCTGA CCGGCTGGGT GCAGCGCCGC CGCGATCACG GTGGCGTGAT CTTCATCGAC
CTGCGCGATC GCGAGGGCCT GGTGCAGGTG GTGTGCGACC CGGATCGTCC GGAGATGTTC
AAGGCCGCGG AAGAAATCCG CAACGAGTTC TGCATCCGCA TCACCGGCAA GGTGCGCCCG
CGTCCGGCCG GCACCGAGAA CGCCAACCTG ACCTCGGGCA AGATCGAGGT GCTGTGCCAT
GAGCTGACCG TGCTGAACCC GTCGGTCACG CCTCCGTTCC AGCTCGATGA CGACAACCTG
TCGGAAACCA CCCGCCTGAC GCACCGCGTG CTGGATCTGC GCCGTCCGCA GATGCAATAC
AACCTGCGCC TGCGCTACAA GGTGGCGATG GAAGTGCGCA AGTACCTGGA CGCACAGGGC
TTCATCGACA TCGAGACGCC GATGCTCGGC AAGAGCACGC CCGAAGGCGC CCGCGACTAT
CTCGTGCCGT CGCGCGTGAA CCCGGGTCAC TTCTTCGCGC TGCCGCAGTC GCCGCAGATC
TTCAAGCAGA TGCTGATGGT CTCGGGCTTC GACCGTTACT ACCAGATCAC CAAGTGCTTC
CGTGACGAGG ACCTGCGCGC CGACCGCCAG CCCGAATTCA CGCAGATCGA CTGCGAAACG
TCGTTCCTGA CCGAACAGGA AATCCGTGAC CTGTTCGAGG ACATGATGCG CACCGTGTTC
AAGAACGCGA TCGACGTGGA CCTGGACGCC AAGTTCCCGG TGATGGAGTT CCGCGAGGCG
ATGGCCCGCT TCGGCTCGGA CAAGCCGGAC CTGCGCGTCA AGCTCGAATT CACCGAACTG
ACCGAGGTGA TGAAGGACGT CGACTTCAAG GTGTTCTCGG GCCCGGCCAA CAGCGACAAC
GGTCGCGTGG TCGGCCTGCG CGTGCCGGGT GGCGGCGCGA TCTCGCGTGG CGAAATCGAT
GCCTACACGC AGTTCGTGGC GATCTATGGC GCCAAGGGCC TGGCGTGGAT CAAGGTCAAT
GAAGTGGCCA AGGGCCGCGA CGGCCTGCAA TCGCCGATCG TGAAGAACCT GCATGACGCC
GCGATTGCCG AGATCCTGAA GCGCACTGGC GCCCAGGACG GCGACATCAT CTTCTTCGGC
GCCGACAAGG CCAAGATCGT CAACGACGCG ATCGGCGCGC TGCGCCTGAA GGTCGGCCAT
TCGGAGTTCG GCAAGAGCAC GGGCCTGTTC GAAGACACCT GGAAGCCGCT GTGGGTGATC
GACTTCCCGA TGTTCGAGTA CGACGAGGAA GATGCCCGCT GGGTGGCCAT GCACCACCCG
TTCACGAGCC CGAAGGACGA GCACCTGCAG TACCTGGAAA CCGATCCGGG CAAGTGCATC
GCCAAGGCCT ACGACATGGT GCTGAACGGC TGGGAAATGG GCGGCGGCTC GGTGCGTATC
TACCGCGAGG ACGTGCAGAG CAAGGTGTTC CGCGCCCTGA AGATCAACGA CGAGGAAGCT
CGCGCCAAGT TCGGTTACCT GCTCGACGCG CTGCAGTACG GCGCGCCGCC GCACGGTGGC
CTGGCCTTCG GCCTGGACCG TATCGTGACG ATGATGGCCG GCGCTGACTC GATCCGTGAC
GTGATCGCGT TCCCGAAGAC GCAACGTGCG CAGGATCTGC TGACGCAGGC CCCGAGCACG
GTCGACGAGA AGCAGTTGCG AGAACTGCAC ATTCGTCTGC GTGCCCAGGA GCCGAAGACC
ACGGCCTGA
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| Protein sequence | MSSMRTHYCG LVTEQLIGQE VALTGWVQRR RDHGGVIFID LRDREGLVQV VCDPDRPEMF
KAAEEIRNEF CIRITGKVRP RPAGTENANL TSGKIEVLCH ELTVLNPSVT PPFQLDDDNL
SETTRLTHRV LDLRRPQMQY NLRLRYKVAM EVRKYLDAQG FIDIETPMLG KSTPEGARDY
LVPSRVNPGH FFALPQSPQI FKQMLMVSGF DRYYQITKCF RDEDLRADRQ PEFTQIDCET
SFLTEQEIRD LFEDMMRTVF KNAIDVDLDA KFPVMEFREA MARFGSDKPD LRVKLEFTEL
TEVMKDVDFK VFSGPANSDN GRVVGLRVPG GGAISRGEID AYTQFVAIYG AKGLAWIKVN
EVAKGRDGLQ SPIVKNLHDA AIAEILKRTG AQDGDIIFFG ADKAKIVNDA IGALRLKVGH
SEFGKSTGLF EDTWKPLWVI DFPMFEYDEE DARWVAMHHP FTSPKDEHLQ YLETDPGKCI
AKAYDMVLNG WEMGGGSVRI YREDVQSKVF RALKINDEEA RAKFGYLLDA LQYGAPPHGG
LAFGLDRIVT MMAGADSIRD VIAFPKTQRA QDLLTQAPST VDEKQLRELH IRLRAQEPKT
TA
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