| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0374 |
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| Symbol | ubiB |
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| ID | 4037161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 398504 |
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| End bp | 400081 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975748 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_582529 |
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| Protein GI | 94309319 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.218508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC TGCTGCGTCT CTGCAAGATA CTGTTTGTCA TCCTGTACTA CGGGCTCGAT
GAACTCGTGC TGTCCGGCTT CAAGAACCGG CGCATCAAGT TCCTCGTCCG AGTCATCACC
ATCGGCCGCA AGCTCGATCA GCCGCGCGGC GAACGCCTGC GTATGGCGCT GACTGCGCTG
GGCCCGATCT TCGTCAAGTT CGGCCAGGTG CTGTCCACGC GCCGTGACCT GATGCCGCCC
GATATCGCCG ACGAACTGGC CAAGCTGCAG GACCAGGTGC CGCCGTTCGA GTCAGCGGTG
GCGGTGAAGA TCATCGAGAA ATCGCTGGGC CGCCGGCTGA CGGAACTGTT CGAGACATTC
GAGCACGAGC CCGTGGCCAG CGCGTCGATC GCCCAGGTTC ACTTCGCCAC GCTGCGCGGC
GGTCCGAGCC ATGGCCGCGA GGTGGCCGTG AAGGTGCTGC GTCCGGGCAT GTTGCCGGTA
ATCGATAGCG ACCTGGCGCT GATGCGCGAC ATGGCCACGT GGCTCGAGCG CGTCTGGGTG
GACGGTCGCC GGCTCAAGCC CCGCGAGGTG GTGGCGGAGT TCGACAAGTA CCTGCACGAC
GAACTCGACC TGATGATCGA GGCCGCCAAT GCCAGCCAGT TGCGCCGCAA CTTTGCCGAA
AGCGACCTGC TTTGCGTGCC CGAGGTGTTC TGGGACTGGT GCACGAGCAG CGTCTTCACG
ATGGAGCGGA TGCATGGCAT TCCGATCTCC CGCACCGAAT CGCTGAAGGC GGCGGGCGTC
GACATGCACA AGCTGGCCGA AGAGGGCGTC GAGATCTTCT TCACGCAGGT GTTCCGCGAC
GGGTTCTTCC ACGCGGACAT GCACCCCGGC AACATCCTGG TGTCGGTCAG ACCCGAGACG
TTCGGCCGGT ATATCGCGCT GGACTTCGGC ATCGTCGGCG CGCTGTCCGA GTTCGACAAA
AACTACCTGG CGCAGAACTT CATCGCGTTT TTCCGCCGCG ACTACCATCG TGTGGCGCTC
CTGCACGTGG AGTCGGGCTG GGTGCCGCCG GAGACCCGGG TCGAGGAACT CGAATCCGCC
GTGCGTGCCT GCTGCGAACC GTACTTCGAC AAACCGCTGC GCGAGATTTC GCTCGGCATG
GTGCTGATGC GGTTGTTCCA GACCTCGCGC CGCTTCAACG TCGAGATCCA GCCGCAACTT
GTGCTGCTGC AGAAGACGCT GCTCAATATC GAAGGCCTGG GCCGCCAGCT TGACCCGGAC
CTCGACCTCT GGAAGACCGC CAAGCCCTTC CTGGAACGCT GGATGTACGA GCAGGTGGGC
TGGCAGGGCG CCTGGGAGCG GATCAAGATC GAGGCGCCGC AATGGGCGAA GATGTTGCCC
GACTTTCCCC GGCTGGCCCA CCAGTTCCTG GAGCGCCGCG CGCTGCAGAA CAACGAAGGG
CAGGAGCGTC TGCTTACCCA ACTGGTGGCC GAGCAGCGCC GCACGAACCG CCGGCTGTCC
ACGGCCCTGC TGCTGATGGG CGGGTTCCTG GCCGGCATCG TGATCGTCCA GGCACTGGCC
TGGGCGGGAT ACTGGTAG
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| Protein sequence | MTRLLRLCKI LFVILYYGLD ELVLSGFKNR RIKFLVRVIT IGRKLDQPRG ERLRMALTAL
GPIFVKFGQV LSTRRDLMPP DIADELAKLQ DQVPPFESAV AVKIIEKSLG RRLTELFETF
EHEPVASASI AQVHFATLRG GPSHGREVAV KVLRPGMLPV IDSDLALMRD MATWLERVWV
DGRRLKPREV VAEFDKYLHD ELDLMIEAAN ASQLRRNFAE SDLLCVPEVF WDWCTSSVFT
MERMHGIPIS RTESLKAAGV DMHKLAEEGV EIFFTQVFRD GFFHADMHPG NILVSVRPET
FGRYIALDFG IVGALSEFDK NYLAQNFIAF FRRDYHRVAL LHVESGWVPP ETRVEELESA
VRACCEPYFD KPLREISLGM VLMRLFQTSR RFNVEIQPQL VLLQKTLLNI EGLGRQLDPD
LDLWKTAKPF LERWMYEQVG WQGAWERIKI EAPQWAKMLP DFPRLAHQFL ERRALQNNEG
QERLLTQLVA EQRRTNRRLS TALLLMGGFL AGIVIVQALA WAGYW
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