Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0314 |
Symbol | |
ID | 4037101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 332393 |
End bp | 333649 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637975688 |
Product | major facilitator transporter |
Protein accession | YP_582469 |
Protein GI | 94309259 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCGA TCCCGCCTTC TTCCCAGCCC GCATCCCTTG CCGACGAGTC CACCCGGACC GAGCCCGCGC GTGACCGCAT GACCAAAGGC GAGTTGCGCG CCAGCCTCAC ACTCGCCAGC ATCTTTGCCC TGCGCATGCT GGGCCTGTTC CTGATCCTGC CGGTCTTTGC CGAGTACGCG CGCACGCTGC CCGACGGGCA CGATGCCCAG CGGGTTGGCA TCGCGATGGG GATCTACGGG CTGATGCAGG CTTTCCTGCA CATTCCATTG GGCTGGCTGT CCGACCGGGT CGGGCGCAAG CCGGTCATGG TCGCGGGGCT GCTGCTCTTC GTAGCCGGCG CGCTGGTTGC AGCGTTCTCC GATACCCTGA CCGGCATCAT CATCGGCCGC GCGTTGCAGG GCATGGGCGC GATCTCGGCG GCCATCACGG CCTGTATCGC GGATCTGACG CGTGAACGCC ATCGCACCAA GGCCATGGCA ATGGTCGGCG GCAGTATCGG CCTGACGTTC GCGCTCTCGC TGGTGATTGC TTCGCCACTT CTGCATTCGA TCGGTATGTC GGGCATCTTC AGCCTGATGG CCGTGTTCGG CGTGGTGGCG ATCGGCGTGA CGCTGTTCCT GGTGCCTGCG CCGCCGCCGC CGCATCCGGT GCGGCTACCG TTCCGCCAAG TGCTGATGAA TGCCGACCTG ATTCGTCTGA ATGTCGGCGT GCTGGCGCTC CATGCGAGCC AGGTGGCCAT GTTCATGGTC GTGCCGGCCA TGCTGAGCGA CGCGGGGATG CCGCTGGACC AGCACTGGAA GGTCTATCTG CCGGTCGTGC TGGTGTCGTT CCTGCTGATG CTGGCGCCGA TGATGGCGGC CGAGCGCTAC GGCAAGGTGC GCCCGGTGCT GCTGGCCTCG GTGGCCCTGA TGACGGTCGT CCAGATCCTG TTCGCGTCGG TCCATGGCCT GTGGCCGATC GTCGGCGTGC TGCTGCTGTT CTTCGTCGCG TTCAACGTGC TGGAGGCGAT GCAACCATCG CTGGTGTCGC GTTACGCCGC GGTCAGCCGT GGGGCGGCGC TTGGCGTCTA CAACACGACC CAGTCGCTGG GCCTGTTCCT CGGTGGCGTG GCCGGCGGCT GGCTGCTCCA GCACGAAGGA CGCAGCGCAG TTTTCATAGG GTGCGCGGTG GTTCTGGTGC TCTGGCTTAT AATCGCGTGG AGCATGAAGG CGCCCCCGGC CCGTAGCCAA GGGAGTGCTT CTGCGGTGGC GGCTTAG
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Protein sequence | MPSIPPSSQP ASLADESTRT EPARDRMTKG ELRASLTLAS IFALRMLGLF LILPVFAEYA RTLPDGHDAQ RVGIAMGIYG LMQAFLHIPL GWLSDRVGRK PVMVAGLLLF VAGALVAAFS DTLTGIIIGR ALQGMGAISA AITACIADLT RERHRTKAMA MVGGSIGLTF ALSLVIASPL LHSIGMSGIF SLMAVFGVVA IGVTLFLVPA PPPPHPVRLP FRQVLMNADL IRLNVGVLAL HASQVAMFMV VPAMLSDAGM PLDQHWKVYL PVVLVSFLLM LAPMMAAERY GKVRPVLLAS VALMTVVQIL FASVHGLWPI VGVLLLFFVA FNVLEAMQPS LVSRYAAVSR GAALGVYNTT QSLGLFLGGV AGGWLLQHEG RSAVFIGCAV VLVLWLIIAW SMKAPPARSQ GSASAVAA
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