Gene Rmet_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0288 
Symbol 
ID4037074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp303789 
End bp304400 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID637975661 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_582443 
Protein GI94309233 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG TCGCTTTCGA GCGTAGCGTA CAGGGAACGG GTGCGAGCCG CCGCCTGCGC 
AATTCGGGCA AGACCCCCGG CATCATCTAC GGCGGCGCCG CCGAACCGAA GATGATCGAA
CTGGATCACA ACGCGCTGTG GCACGCCCTG AAGAAGGAAG CCTTCCACTC GTCGATCCTG
GATCTGGAAG TGGCTGGCAA GTCCGAGAAG GCCCTGCTGC GTGCGTTCCA GATGCACCCG
TTCAAGCCGC TGGTGCTGCA CGTTGACTTC CAGCGCGTGT CGGCCACCGA GAAGATCCAC
GTGAAGGTGC CGCTGCACTT CATGAACCAG GAAACCGCTC CTGGCGTGAA GCTGGGCCAC
GGTATCGTCA GCCACATCCT GAACGATCTG GAAGTGTCGT GCCTGCCGGC CGACCTGCCT
GAGTTCATCG AAGTGGATCT GGCCGCAGCC GAGCTGAACC AGACCATCCA CCTGTCGGAC
CTGAAGCTGC CGAAGGGCGT GACCGCCATC ACCCATGGCG ACGAAAACCC GGCCATCGCC
AGCATCACGC TGCCGGCTGG CGCTCAGTCG TCGGAAGCTG CCGAAGGCGG CGAAGAAACG
CCCGCTGCCT AA
 
Protein sequence
MKVVAFERSV QGTGASRRLR NSGKTPGIIY GGAAEPKMIE LDHNALWHAL KKEAFHSSIL 
DLEVAGKSEK ALLRAFQMHP FKPLVLHVDF QRVSATEKIH VKVPLHFMNQ ETAPGVKLGH
GIVSHILNDL EVSCLPADLP EFIEVDLAAA ELNQTIHLSD LKLPKGVTAI THGDENPAIA
SITLPAGAQS SEAAEGGEET PAA