Gene Rmet_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0232 
Symbol 
ID4037018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp248112 
End bp250220 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content67% 
IMG OID637975605 
ProductUvrD/REP helicase 
Protein accessionYP_582387 
Protein GI94309177 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTACCGG AACTTGCCCC TGAAGCCGCT GCCGAGTCGC CCGACACCGA GGTCACCGAC 
GCCCCCGCCT ATCTTTCCCG GCTGAATCCG GAACAGCGCG CGGCGGTGGA GTACGACGGT
GACGCGCCGC TGCTGATCAT TGCCGGCGCG GGCTCTGGCA AGACCAACAC GCTCGCGCAT
CGGGTGGCGC ATCTGGTCGT GAACGGCGCA GATCCGCGCC GCATCCTGCT GCTGACGTTC
TCGCGCCGCG CCGCCTCCGA AATGGGCCGC CGTGTCGAGC GCATCGTCGA CCAGGCACTC
GGCATCCAGA CCGGCGCGGG GCGCGCCGCG CTGCAGTGGT CAGGCACGTT CCACGCCATC
GGCGCCCGCC TGCTGCGCGA GTACGCCGAA ACGCTCGGGC TTGCTCCGAC CTTCACCATC
AGCGACCGCG GCGATGCGGC CGACCTGATG CACGTGGTAC GCCATGACCT CGGACTATCC
GAGCAGACCT CACGCTTTCC GCGCAAGGAA ACCTGCCTCG CGATCTATTC ACGCGTGGTC
AACACGCAGT TGCCGCTCGA GGTTGTGCTG AAGACGCAGT TCCCGCGCTA CGCGATGTGG
GCGGACGCGC TCAAGGGCCT GTTCGCCGCC TACGTGGAAG CCAAGCAGAA GCAGCAGGTG
CTCGACTACG ACGACCTGCT GCTCTACTGG GCGCAGGCGA TGACCGAGCC CGCACTGGCG
CAGGACATGG GCGCGCGCTT CGACCACGTG CTGGTCGACG AGTACCAGGA CACCAACGCG
TTGCAGGCGT CGATCCTGCT GGCGCTCAAG CCGCAAGGGC GCGGCCTGAC CGTGGTGGGC
GATGACGCGC AGTCGATCTA CGCATTCCGC GGCGCCACCG TGCGCAATAT CCTCGATTTC
CCGACACAGT TCTCGCCGCC GGCCGAGCAG GTCACGCTGT CGCAGAACTA TCGCTCGACG
CAGCCGATCC TCGGCGCCGC CAATGCCGTG ATTGGCCTTG CGGCCGAACG CTTCACCAAG
GATCTCTGGT CCCTGCGCGA ATCGGCGGAG AAGCCCGGCG TGGTGGTGGT CAACGACGAG
GCCGAGCAGG CGCGCTTCGT CGTCGAGCAG GTACTGGCGC GGCGCGAGGC TGGCTTGTCG
CTGACGCAGC AGGCGGTGCT GTTCCGCGCG GCCGACCACA GCGCCCAGGT CGAGATCGAG
TTGGCCCGGC GCAATATCCC GTTCGTGAAG TTCGGCGGAC TGAAGTTTCT GGAGTCGACG
CACGTCAAGG ACGTGATGGC CGTGGTGCGC TGGCTGGAAA ATCCACGCGA CCGCATGGCC
GGATTCCGCA CGCTGCAGTT GCTGCCCGGC ATCGGCCCGA AAACGGCCGC GCGCGTGCTC
GAAGGACTGG AAGCCGCCAC CGAACCGTTG ATCGCGCTCG AAGCCTTCGA GCCGCCCCCC
GCCGCCGCGC CCGCCTGGGA TGAACTGGTG ACGCTGGCGC GTGCGCTGAT GGCGCCGACC
TCGCCCTGGC CATCTGAATT CGAACAGGTG ATCGCCTGGT ACATGCCGCA CCTCGAACGG
ATGCACGACG ATGCCGCCGC GCGGCAGGCG GACCTGCAGC AGATCGAGCG CATCGCGGCC
ACCTATGCGT CGCGGGAACG CTTCCTCACC GAACTCACGC TCGACCCGCC CAGCGCGTCG
AGCGACGAAT CCGGCGTGCC CTCGCGCGAC GAGGACTACC TGATTCTGTC GACGATCCAT
TCGGCCAAGG GGCAGGAGTG GAAGGCCGTG TACGTGCTCA ATGCGGTCGA TGGCTGCATG
CCATCCGATC TTGCCACCGG CACCACCGAG GAAATCGAGG AAGAGCGCCG CCTGCTGTAC
GTGGCGATGA CGCGCGCGCG CGACCACCTC GACATCGTCG TGCCACAACG CTTCTACGTG
CACAACCAGG TCGGCTTTGG CGATCGCCAC GTCTACGCAT CGCGCACGCG CTTCCTGCCG
AACCGCGTGA TGCCGAATTT CTACAGCCGC TCGTGGCCGC CCGCGCCGAT GCCGGGGGAA
GGCCAGCAGG CGAAGGCCTC GCTACCGCAG GTAGACCTCG CCAGCCGAAT GCGCGGCATG
TGGAAGTAG
 
Protein sequence
MLPELAPEAA AESPDTEVTD APAYLSRLNP EQRAAVEYDG DAPLLIIAGA GSGKTNTLAH 
RVAHLVVNGA DPRRILLLTF SRRAASEMGR RVERIVDQAL GIQTGAGRAA LQWSGTFHAI
GARLLREYAE TLGLAPTFTI SDRGDAADLM HVVRHDLGLS EQTSRFPRKE TCLAIYSRVV
NTQLPLEVVL KTQFPRYAMW ADALKGLFAA YVEAKQKQQV LDYDDLLLYW AQAMTEPALA
QDMGARFDHV LVDEYQDTNA LQASILLALK PQGRGLTVVG DDAQSIYAFR GATVRNILDF
PTQFSPPAEQ VTLSQNYRST QPILGAANAV IGLAAERFTK DLWSLRESAE KPGVVVVNDE
AEQARFVVEQ VLARREAGLS LTQQAVLFRA ADHSAQVEIE LARRNIPFVK FGGLKFLEST
HVKDVMAVVR WLENPRDRMA GFRTLQLLPG IGPKTAARVL EGLEAATEPL IALEAFEPPP
AAAPAWDELV TLARALMAPT SPWPSEFEQV IAWYMPHLER MHDDAAARQA DLQQIERIAA
TYASRERFLT ELTLDPPSAS SDESGVPSRD EDYLILSTIH SAKGQEWKAV YVLNAVDGCM
PSDLATGTTE EIEEERRLLY VAMTRARDHL DIVVPQRFYV HNQVGFGDRH VYASRTRFLP
NRVMPNFYSR SWPPAPMPGE GQQAKASLPQ VDLASRMRGM WK