Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0179 |
Symbol | cca |
ID | 4036964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 186333 |
End bp | 187577 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637975551 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_582334 |
Protein GI | 94309124 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.468455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTGT ACGCAGTGGG CGGCGCCGTC CGCGACCAGT TGCTCGGAAA GCCGAGCCAG GACCGTGACT ACGTGGTGGT GGGCGCCACG CCCGCGGACA TGGAGGCCGC CGGCTTCAAG CCGGTGGGCA AGGATTTCCC CGTTTTCCTC CATCCGCACA CCAAGGCCGA GTACGCGCTG GCGCGGACCG AACGCAAGAC CGCGGTCGGC TACAAGGGCT TTGCCTTCTA TACCGGCGCC GACGTGACCC TGGAAGAGGA CCTCGTCCGG CGCGACCTGA CCATCAACGC GATGGCCCAG GCGGTGGACG AGCATGACAA CCTCGTCGGC CCGGTGATCG ACCCCTATGG CGGCCAGAAG GACCTGGCCG CGCGCAAATT CCGCCACGTG TCCGACGCCT TCGCCGAGGA TCCGGTGCGT ATCCTGCGCG TGGCGCGTTT CGCGGCGCGC TTTCACGAAT TCACGGTGGC GCCGGAGACC GTCGCGCTGA TGCGCAAGAT CGTCGACGCG GGCGAGGTGG ATGCGCTGGT GCCCGAGCGC GTCTGGCAGG AACTGTCTCG CGGGTTGATG GAGGCAAAGC CGTCACGCAT GTTCGACGTG CTGCGCGAAT GCGGCGCGCT GGCCCACCTG CTGCCGGAAC TCGATCGCCT ATGGGGCGTG CCCCAGCGCC CGGAATATCA TCCCGAAGTC GATACCGGCG TGCACGTGAT GATGGTGATC GACTACGCGG CCAGCGTCGG CGCATCGCTG CCGGTGCGCT TCGCCGCGAT GGCGCACGAC CTCGGCAAGG GCACCACGCC CGAGGACATG CTGCCCCGGC ACATCGGCCA CGAGCAACGT GGCGTCAAAT TGCTCGAAGC CATCTGCCAG CGCCTGCGCG TGCCGAACGA TTGCCGTGAG CTGGCCCTGG TGGTGGCGCG CGAGCACGGC AATATCCATC GCAGCACGGA GTTCGGCGCG GCGGCACTGA CGCGGCTGGT CGAGCGTTGC GACGCGCTGC GCAAGCCGGA GCGGTTCGCT GAGGCGCTGC TGGCCTGCGA GGCCGATGCG CGTGGACGCC TGGGTTTTGC GGATAAGGAC TACCCGCAGG CGGATCGCCT GCTAGCTGCG CGTGACGCGG CGGCATCCGT GGACGCCGGC GCGATTGCCA AGGCTTGCGG GGACAAGGTC GATCAGATCA AGGACCGGGT GCACAAGGCC AGGGTGGCGG CGGTGGCGCA GCGGCTGGGA ATGGCGGAGG AATAG
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Protein sequence | MQVYAVGGAV RDQLLGKPSQ DRDYVVVGAT PADMEAAGFK PVGKDFPVFL HPHTKAEYAL ARTERKTAVG YKGFAFYTGA DVTLEEDLVR RDLTINAMAQ AVDEHDNLVG PVIDPYGGQK DLAARKFRHV SDAFAEDPVR ILRVARFAAR FHEFTVAPET VALMRKIVDA GEVDALVPER VWQELSRGLM EAKPSRMFDV LRECGALAHL LPELDRLWGV PQRPEYHPEV DTGVHVMMVI DYAASVGASL PVRFAAMAHD LGKGTTPEDM LPRHIGHEQR GVKLLEAICQ RLRVPNDCRE LALVVAREHG NIHRSTEFGA AALTRLVERC DALRKPERFA EALLACEADA RGRLGFADKD YPQADRLLAA RDAAASVDAG AIAKACGDKV DQIKDRVHKA RVAAVAQRLG MAEE
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