Gene Rmet_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0149 
Symbol 
ID4036933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp153809 
End bp154585 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID637975521 
Productexodeoxyribonuclease III (xth) 
Protein accessionYP_582304 
Protein GI94309094 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGGA TTATCAGCGC CAACCTCAAC GGCATCCGCT CCGCCTCCAA GAAAGGCTTC 
TTCGAGTGGA TGGGCAAGCA GGAAGCGGAC ATGGTCTGCG TTCAGGAACT CAAGGCCCAG
GAAGCCGACA TGACCGAGGC GTTCCTGGCG CCACACGGCT ATCACGGCTA CTTCCACTAT
GCCGAGAAAA AAGGCTACAG CGGCGTGGGC CTCTATACCC GCCACAAGCC GGAGCGCGTG
ATCATCGGCT TCGGCAATAC GGAGTTCGAT GCTGAGGGTC GCTACGTCGA AGTGCAGTAT
CCGCACCTCG CCGTGATCTC GGTCTACGTG CCTTCCGGCT CAAGCTCGGA GGAGCGCCAG
CAGGCCAAGT TCCGCTTTAT GGAAGCCTTC CTGCCGCACC TGCTGGAGCT GAAAGCCAGC
GGCCGCGAGA TCGTGCTGTG CGGTGACGTG AACATCGCCC ACAAGGAAAT CGACATCAAG
AACTGGAAGG GCAACCTGAA AAACTCCGGT TTCCTGCCCG AAGAGCGCGC CTGGATCGGC
GAACTGTTCG ACAACCACGG CTATGTCGAC GTATTCCGCC AGCTGGACCC GCGCCCCGAA
CAGTACACAT GGTGGAGCAA CCGCGGTCAG GCGTACGCGA AGAACGTGGG GTGGCGCATC
GATTACCACC TGACCACGGC GAAAATCGCG GCTACCGCCA AGGCTACGTC GATCTACAAG
GACGAGAAGT TCAGCGACCA CGCCCCGCTG TCGATCGATT ACGATTTTCC GTTGTGA
 
Protein sequence
MLRIISANLN GIRSASKKGF FEWMGKQEAD MVCVQELKAQ EADMTEAFLA PHGYHGYFHY 
AEKKGYSGVG LYTRHKPERV IIGFGNTEFD AEGRYVEVQY PHLAVISVYV PSGSSSEERQ
QAKFRFMEAF LPHLLELKAS GREIVLCGDV NIAHKEIDIK NWKGNLKNSG FLPEERAWIG
ELFDNHGYVD VFRQLDPRPE QYTWWSNRGQ AYAKNVGWRI DYHLTTAKIA ATAKATSIYK
DEKFSDHAPL SIDYDFPL