Gene Rmet_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0142 
SymbolslmA 
ID4036926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp146595 
End bp147245 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID637975514 
Productnucleoid occlusion protein 
Protein accessionYP_582297 
Protein GI94309087 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.219358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA CCATTTCAAG CCAGGCAGAG GCGGACACGC CCGCTGGCCA CTCGCCGGAA 
GCGGCGCCCG CGCGCAAGCG TCCGCGCCCG GGTGAACGCC GTATCCAGAT CCTCCAGACG
CTGGCAGGGA TGCTCGAACA CCCGCGCGGG GAAAAGATCA CCACCGCGGC GCTGGCTGCG
AAGCTCTCGG TATCCGAGGC CGCGCTGTAC CGGCACTTTG CCAGCAAGGC GCAGATGTTC
GAAGGCCTGA TCGGCTTCAT CGAGCAGACC GTCTTCGGCC TGATCAACCA GATCACCACG
CAGGAAGAGC ATGGGCTGCG CCAGGCGCAG GCGATCGTGC GCATGCTGCT GTCGTTCGCC
GAGAAGAACC CCGGCATGAC GCGTGTGCTG ACTGGCGAGG CGCTCGTCGG CGAACACGAG
CGCTTGCAGG AGCGCATCAA CCAGATGATC GACCGTATCG AGGCGTCGCT GCGTCAGTGT
CTGAAGGTGG CCGTCAGTCA GGCGGCGTTT CCGCCCGATG CCGATATTCC GTTGCGCGTG
GCGCTGATCA CGGCGGCCGT GCAGGGGCAC TGGCATCGCT TCGTGAAGAG CGGTTTCCGC
AAGGCGCCGA CCGAGAATAT CGATGCGCAA CTGCGCATCC TGCTGGGCTG A
 
Protein sequence
MTQTISSQAE ADTPAGHSPE AAPARKRPRP GERRIQILQT LAGMLEHPRG EKITTAALAA 
KLSVSEAALY RHFASKAQMF EGLIGFIEQT VFGLINQITT QEEHGLRQAQ AIVRMLLSFA
EKNPGMTRVL TGEALVGEHE RLQERINQMI DRIEASLRQC LKVAVSQAAF PPDADIPLRV
ALITAAVQGH WHRFVKSGFR KAPTENIDAQ LRILLG