Gene Rmet_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0133 
Symbol 
ID4036917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp139272 
End bp139799 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637975505 
Productnuclear export factor GLE1 
Protein accessionYP_582288 
Protein GI94309078 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0421981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC GCACCCTGCT GGCATCGTTG CTTATCGTTG CCGCCCCCAT GGCTTCGGCC 
CATATCGTTT TCGAACAGAA GCAGGCGCCC GCGGGCAGCT ACTACAAGGG CACGTTGCTG
GTCGGTCATG GCTGCAACGG CAGCGCGACG CGCGCGGTAA CGGTGACAAT CCCGGATGGC
GTACAGGGCG TGCATCCGCA ACCGAAGCCG GGCTGGCAAC TCGAGATCAA ACGGGCGAAG
CTCGCCAAGC CCTATACCTC GCACGGCAAG ACTATCGACG AGGACGTGCA TACGATCCGG
TGGTTTGGCA ACACGCTCGC CGACGAACAC TTCGACGAAT TCCGCATGCT GATGAAGCTG
CCCGAACAGG GCGGCAAGCT CTACTTCCCG GTGCTACAGG AATGCGAGAG CGGCAAGTCC
GAGTGGACCC AGATTCCCGC CGATGGCCAG ACCACCCGGG ACCTGAAGAC CCCGGCAGCG
GAGCTTGAGG TGTTGCCACC TGCCGGCGGC CACGTGCACT CGCACTGA
 
Protein sequence
MNIRTLLASL LIVAAPMASA HIVFEQKQAP AGSYYKGTLL VGHGCNGSAT RAVTVTIPDG 
VQGVHPQPKP GWQLEIKRAK LAKPYTSHGK TIDEDVHTIR WFGNTLADEH FDEFRMLMKL
PEQGGKLYFP VLQECESGKS EWTQIPADGQ TTRDLKTPAA ELEVLPPAGG HVHSH