Gene Rmet_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0121 
Symbol 
ID4036905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp126615 
End bp127544 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID637975493 
Productbeta-lactamase-like protein 
Protein accessionYP_582276 
Protein GI94309066 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.381436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.658094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CTCCGCTGCT GCCATCGACG ATGCGCGTGT TCGAACGCGG CTGGCTATCG 
GCAAACAACA TCCTGTTCAT TGACGATGCC ACCGGGGAGT CGGCGCTCGT CGATACGGGC
TACGTCACAC ACGCAGCGCA GACCGAGGCG CTCGTGGCGG CAGCGCTCGA TGGCCGGCCG
CTGACTCATA TCATCAACAC GCATCTGCAC TCCGACCATT GCGGCGGCAA CGCGGCATTG
CAGGCACGCT GGCAGCCCCG CACGGCGATT CCGGCGGCGG AGGCAGCGGC GGTCGCTTCC
TGGGACCATG TCGCGCTGTC GTTCGATGCC ACGGGCCAGC AGTGCGCGCG CTTCGGCTTC
GATGCCTTGC TGCACGATGG GGACCGCCTG CGGCTCGGTG GGATCGACTG GGACGTAGTG
GCTGCTCCGG GCCATGATCC ACACGCGGTG ATGCTGTTCG CGCCGTCGCA CGGCATCCTG
ATTTCTGGCG ATGCGCTCTG GGAAAGCGGC TTCGGCGTGA TCTTTCCGGA GCTCGATGGC
GAGAGCGGCT TCGTCGAGCA GGCCGCGGTG CTCGAGCGCA TCGCGGCGCT CGATGCGCGC
ATCGTGATCC CCGGACACGG GCGGCCGTTT GACGATGTGA CGGGCGCCAT CTCGCACGCC
AGAAGCCGGC TCGACTACCT GCAAGGCGAT GGCGTGCGCA ATGCCACCCA CGCCGTGCGC
GTGCTCGTGA AATTCAAGCT GCTGGAACTG CAGGCGGTCT CGCGCGAGGC GCTGTTCGCG
TGGATGCGCG ACACGCCGCT GATGCAGCGC ATTCACGCAC GCTTCATGGC GGGGCAATCC
ATCGAGGATG TGTTCGACCA GACGTTGCGC GCGCTGGCCA AGGCGGGTGC GCTGACGACC
GAAGGCGATC AGGTCCGCAA CCAGGACTGA
 
Protein sequence
MSTPPLLPST MRVFERGWLS ANNILFIDDA TGESALVDTG YVTHAAQTEA LVAAALDGRP 
LTHIINTHLH SDHCGGNAAL QARWQPRTAI PAAEAAAVAS WDHVALSFDA TGQQCARFGF
DALLHDGDRL RLGGIDWDVV AAPGHDPHAV MLFAPSHGIL ISGDALWESG FGVIFPELDG
ESGFVEQAAV LERIAALDAR IVIPGHGRPF DDVTGAISHA RSRLDYLQGD GVRNATHAVR
VLVKFKLLEL QAVSREALFA WMRDTPLMQR IHARFMAGQS IEDVFDQTLR ALAKAGALTT
EGDQVRNQD