| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0078 |
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| Symbol | |
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| ID | 4036862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 84692 |
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| End bp | 85948 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975450 |
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| Product | patatin |
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| Protein accession | YP_582233 |
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| Protein GI | 94309023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.767923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC TCTCCGCACA TTCGGCGGAG GCCTCGGCCC GCGCCCGCCA GCGCCAGAGC
ACCGCTCTGG TGATGATGGG CGGTGGCGCG CGGGCCGCGT ACCAGGCCGG TGTGCTGTCC
GGTATTGCGA AGATCGCCGC GCGTCTTGGG CTGGCACATT GCCCGCTGCC GTTCGGCATC
ATCGCCGGGA CATCCGCGGG TGCGATCAAT GGCGCGGGCC TGGCGGTCGG CGCCGCCGAC
TTCCGCGCGG CCACGGACAA GCTGTCAGCG CTCTGGCACA GCCTGCACGC CGACGACGTC
TACCGGACCG ACGTGCTGCG CGTGGGCGTT TCCGGCGCGC GATGGCTGTC CTCGCTGGCC
TTCGGCTGGG TCACGCGGCG GTCATCGCCA CGCGCGCTAT TCGACAATGC GCCGCTCGGC
AGCTTCCTGA CCGAGCTGTT CGAGCCGGAG CGCGTCCAGG CCAGTCTGGA CGCCGGCGTG
CTGCAAGCCT TCGCGGTCAC GGCGCTGTCG TACAGCACCG GCCGCCATGT CACGTTTTAT
CAGTCTCACC GCCGTATCCA CGGATGGCAA CGCAGCCAGC GCATGGCCGT GGAGTCCGCG
ATTGGCGTCG ATCACCTGCT GGCATCGGCC TCGATTCCGT TCCTGTTCCC GGCCATACCG
CTCGAACTCG AAGGCCATCA CGAATGGTTC GGCGACGGCA CGATGCGGCA GATGTCGCCG
CTGTCACCCG CGATTCACCT TGGCGCGTCG CGCATCCTGG CCATCGGCGC CGCGTCGCGC
CAGCGGGCCG GCTGGTTCGA TACCGTGCCA TCGGGCGGCT ATCCGTCGCT GGCGCAGGTT
GGCGGCCAAG CCCTGGCCAG CATCTTCCTG GATGGCCTGC AGGCCGACAT CGAGCGACTC
ATGCACATCA ACCGGCTGCT GTCGCGGATG CCCGAGATGG CCAACGACAC CGAAGGCTGG
CGCCCGGTGC AGGTCATGAC GATTTCACCC AGCGAGCCGA TCGAGGCCAT CGCGGCCGAG
CACCTGAATC GCCTGCCACG CACCGTGCGC GCGTTCCTGT CGCCACTGGG CGGCACCGAG
GCGCGCGGCG CCGCGTTCGC GAGCTATCTG TTGTTCGAAC CCGAGTTCAC CCAGGCCTTG
CTGGCGCTGG GCGAACGTGA CGCGGCCGCC CAGGGCGACC AGATCGCCGC ATTCCTCTAT
GGAGTGGTGC CGGAAACCAC GCCGGCCAAA AAAGAAGTGA CAGAAGTGTC GCAATAG
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| Protein sequence | MSALSAHSAE ASARARQRQS TALVMMGGGA RAAYQAGVLS GIAKIAARLG LAHCPLPFGI
IAGTSAGAIN GAGLAVGAAD FRAATDKLSA LWHSLHADDV YRTDVLRVGV SGARWLSSLA
FGWVTRRSSP RALFDNAPLG SFLTELFEPE RVQASLDAGV LQAFAVTALS YSTGRHVTFY
QSHRRIHGWQ RSQRMAVESA IGVDHLLASA SIPFLFPAIP LELEGHHEWF GDGTMRQMSP
LSPAIHLGAS RILAIGAASR QRAGWFDTVP SGGYPSLAQV GGQALASIFL DGLQADIERL
MHINRLLSRM PEMANDTEGW RPVQVMTISP SEPIEAIAAE HLNRLPRTVR AFLSPLGGTE
ARGAAFASYL LFEPEFTQAL LALGERDAAA QGDQIAAFLY GVVPETTPAK KEVTEVSQ
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