Gene Rmet_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0076 
Symbol 
ID4036860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp83133 
End bp83624 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID637975448 
Productbifunctional ADP-heptose synthase 
Protein accessionYP_582231 
Protein GI94309021 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.477783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCGCCTTCGA ATCCAAGCTG GTCCCCGCCG ACGATGTCGC GGCCCTGCAC 
GCCGCAGTGG CAAAGCTGCC GCGCCCGCTG GTCTTCACCA ACGGCGTGTT CGACATCCTC
CATCGCGGCC ACGCCACGTA TCTGGCGCAG GCGCGCGCGA TGGGCGCCAG CCTGGTGGTC
GGGGTGAACA GCGACGCTTC GGTGAAGATG CTCGGCAAGG GCAACGATCG CCCGCTCAAT
CACGATGCCG ATCGCATGGC GCTGCTGGCC GCGCTCGCGT CAGTGGATCT GGTGGCGATG
TTCCGCGAGA AGACGCCGGT GGAACTGATC CGGCTGGTGC GGCCGGACGT TTACGTGAAG
GGCGGCGACT ACGACATCGA CACGCTGGAG GAAACGCGGC TGGTGCGTAG CTGGGGCGGA
CAGGCATACG CGATCCAGTT CCTGCACGAC CGCTCGACCA CCAAGCTGCT GACGAAGGTA
CGCGGCGGCT GA
 
Protein sequence
MNAPAFESKL VPADDVAALH AAVAKLPRPL VFTNGVFDIL HRGHATYLAQ ARAMGASLVV 
GVNSDASVKM LGKGNDRPLN HDADRMALLA ALASVDLVAM FREKTPVELI RLVRPDVYVK
GGDYDIDTLE ETRLVRSWGG QAYAIQFLHD RSTTKLLTKV RGG