Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0070 |
Symbol | |
ID | 4036854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 77417 |
End bp | 78358 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637975442 |
Product | hypothetical protein |
Protein accession | YP_582225 |
Protein GI | 94309015 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACA AGTCAAACGC CTTCCTGGCC GGCGTGTTCA CCATCGGCCT TGCCATCCTG GTATCGGTTT CCCTGTTCTG GTTCAGCAGC GATCACACCG TGCGCGTGCC GTACGACCTG ATCACGCGAT CGACGGTGAA CGGACTGGGG CCGCAGGCCG ACGTGAAATA TCGCGGACTC GAGGTCGGCA AGGTCTTATC TATCAAGTTC GATCCGCAGG TGCCGGGCCA GATCATCGTC CGCATCAGCA TCAACCATGA CACGCCAATC ACGCGCACCA CGTATGCCAC GCTAGGCTTC CAGGGCGTGA CCGGCATTGC CTACGTGCAG CTCGACGATT CCGAGCGCAC GGAGGGCGAC ACGAGCAGCT CGCCGCGGCT GACGACGTCG GCACGCGAGC CCGCGCGCAT CGTGATGCGG CCCGGTTTCT TCGAGGAACT GGAAAAGCGC GGCGATTCAC TGCTGACGCA GGCCGAAACA CTGATGGCAT CGCTCGACAG CATGTTCCAG CCCGCCAACC GCGACGAGTT GATGGCGGCC ATCCGGGCCG TGCACAAGAC CGCGGACGAC TACTCGCATC TGAAGTCGAC CCTGCAGCCG GCCGCCGAGA AGCTGCCCAA GGCCGTGGAC AACCTGAACG CAGCGCTGGT GTCGACGAAG CGGCTGACCG ATGAGATCGG CAACCCCGAC GGCACGGTCA TGCGCACGGT CAACCGCGTT GGCAACGACC TGCAGGTGGC TGCCGATTCA GTACAGTCCA CCACCACCAT CGTGAATCAG GAAACGCTGC CACAGATCAA CGGACTGGCA CGCGAGTCAC GCCAGGCGGT GCGCAGCATC GACCGCGCCG CCAGTCAGTT CAACGACAAG CCAAGTAGCG TGCTGTTCGG CGGGCCATCG CCCACGCCTG GCCCGGGCGA GCCGGGTTTC CAGGCGCCCT GA
|
Protein sequence | MENKSNAFLA GVFTIGLAIL VSVSLFWFSS DHTVRVPYDL ITRSTVNGLG PQADVKYRGL EVGKVLSIKF DPQVPGQIIV RISINHDTPI TRTTYATLGF QGVTGIAYVQ LDDSERTEGD TSSSPRLTTS AREPARIVMR PGFFEELEKR GDSLLTQAET LMASLDSMFQ PANRDELMAA IRAVHKTADD YSHLKSTLQP AAEKLPKAVD NLNAALVSTK RLTDEIGNPD GTVMRTVNRV GNDLQVAADS VQSTTTIVNQ ETLPQINGLA RESRQAVRSI DRAASQFNDK PSSVLFGGPS PTPGPGEPGF QAP
|
| |