| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0068 |
|---|
| Symbol | |
|---|
| ID | 4036852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 75351 |
|---|
| End bp | 76673 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637975440 |
|---|
| Product | VanZ like protein |
|---|
| Protein accession | YP_582223 |
|---|
| Protein GI | 94309013 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5652] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGG CAACGCCCCC GCCCTCTCCC CACTCCCCCG CGCCTCCGGA ACCGCAGCGG
AGCCAACCGG AGGACACGCG CCAGTCCGAG CTCGAAGTCG CGCTGCTGCC GCGTCACTCG
CCGGTGGCGC GCGTGGGCCT GCTCTGCTTC ACACTGCTCG TGGTGTACGC GAGCCTCTAT
CCGTTCACCG GATGGGTCAA CAACGGCGTC TCGGCGTTTG CCTTCCTGAC CGCGCCGAAG
CCGCGCTACA TCACCGAGTT CGACCTGCTG ACCAATGTGC TCGGCTACTG CCCGTTCGGC
GCGCTCGTTG TGCTGTCTCT GCATCCGCGC GTGTCCGGCG CACGGGCCAC GCTGATCGCG
CTGGTGGCCG GCGCGCTGCT GTCCGGCTCG ATGGAGGCGC TGCAGACCTG GCTGCCAACG
CGCATCTCCT CGAACATTGA CCTGATCACG AATGCGCTGG GCTCACTGCT CGGCGCGGCC
GTGGTGGCGC CGTTCACCAG TGCGCTGGTG GACCGCGGCA CCCTGACGCG ACTGCGCTAT
GCGTGGTTCG AGCCGTACGC GAGCTTCGCG ATCATCCTGA TCCTGCTCTG GCCGTTCGCG
CAGATCTTCC CGCAGGAGCA TCTGTTCGGC ATGGGCGGGA TCGTGCGGGA ATGGCTGACC
GACCCGGACT CGTGGCCGAT GGAGCTGGTG CAGGCCTATT TCCCTTCGCT GATCGCATGG
CAGGACAACA TCGGCCTGCG CCCTGACGAT ATGCAGGGCC AGTTGATGCT GGAGACCATG
GTCACGGCAT CGAGCTGGAT CGGCACCGGC CTGTTCGCCT CGATCGCCAT GCGGCGCACC
GCGCCGATGC TGCGCATCCT GGCGGGCCTG CTGACTGCCG CGCTCATCAT CAAGGCCGCG
GTAGCCGAGC TGCAGTTCCC GGACGACAAC GCCTTCAACT GGCTGTCCGA GGGGGGCCGC
TTCGCGCTGC TGACGAGTTC GCTGGTGCTG GTGCTGCTGT TGCGCCTGCC ACGCTGGCTG
CGGGCGATCC TCGCCACGCT GGCGCTGGCG ACGCTGATCG TGCTGACCAA CGTGCTGCCG
TCGAACCCGT ACGCGTGGAT TTCGGAGCAA GGCTGGCGCA TGGGCCGCTT CATCCATTTC
AACAGCCTCG CGCAATGGCT GGGCTGGCTA TGGCCGCTCC TGGCGTTCTT CTACATCATC
TGGCGATTCG AGCAGGCCAG CGTGCGACGC CGGCTGGTGC GGCGCGCGAG GCGCCGCGCC
ACCGAGCGCG CGGTGGCGGC CGCGACGGAA GCGCAGCAGG AATCGAAGCG GCCGCAATCC
TGA
|
|---|
| Protein sequence | MAQATPPPSP HSPAPPEPQR SQPEDTRQSE LEVALLPRHS PVARVGLLCF TLLVVYASLY
PFTGWVNNGV SAFAFLTAPK PRYITEFDLL TNVLGYCPFG ALVVLSLHPR VSGARATLIA
LVAGALLSGS MEALQTWLPT RISSNIDLIT NALGSLLGAA VVAPFTSALV DRGTLTRLRY
AWFEPYASFA IILILLWPFA QIFPQEHLFG MGGIVREWLT DPDSWPMELV QAYFPSLIAW
QDNIGLRPDD MQGQLMLETM VTASSWIGTG LFASIAMRRT APMLRILAGL LTAALIIKAA
VAELQFPDDN AFNWLSEGGR FALLTSSLVL VLLLRLPRWL RAILATLALA TLIVLTNVLP
SNPYAWISEQ GWRMGRFIHF NSLAQWLGWL WPLLAFFYII WRFEQASVRR RLVRRARRRA
TERAVAAATE AQQESKRPQS
|
|---|
| |