Gene Rmet_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0067 
Symbol 
ID4036851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp74671 
End bp75339 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID637975439 
Productpyrrolidone-carboxylate peptidase 
Protein accessionYP_582222 
Protein GI94309012 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID[TIGR00504] pyroglutamyl-peptidase I 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GTACTGTCCT GCTGACCGGC TTCGAGCCGT TCGAGAATGA ACCGGTGAAT 
CCGTCCTGGG AGGCGGTGCG TGCGCTCGAT GGCGAGCGCG TGGGCGATGC CTTGATCGTT
GCGCGGCAGT TGCCCTGCGT CTTCGGCAAG GCCATCGAGG CAATGGACGC GCTGGTCGAT
ACGCTACGCC CTGACGTGGT GATCGCCGTC GGGCAGGCCG GTGGCCGCAC CGAGCTGTCG
ATCGAGCGCG TGGCGATCAA TGTCGACGAT GCCCGCATTG CCGACAACGC CGGGGCCCAG
CCGATCGACG CGCCGATCGC CAAGGATGGC CCGGTCGCGT ACTTCTCGAC CCTGCCGATC
AAGGCGATCG TGCGCGACAT GCGCGCGGCC GGCGTGCCCG CGATGGTCTC GCAGACCGCC
GGTACCTTCG TCTGCAATCA CGTGTTCTAT GGGCTGATGC ATGTGCTTGC CCATCGCAAG
GCGGGCAGCG CCGCCGCGCC CACGCGCGGG GGATTCATCC ATATTCCCTA TCTGCCCGAA
CAGGCCGCGC GTCATCCGGG GGCGCCGAGC CTCGCACTCG ATACGCTGAT CGCGGGGTTG
CGCGTGGCGG TGGCCACGTC GCTATCGACG GACGCGGATA TTCGCGAGGG CGGCGGACAA
CTGCACTAG
 
Protein sequence
MTTRTVLLTG FEPFENEPVN PSWEAVRALD GERVGDALIV ARQLPCVFGK AIEAMDALVD 
TLRPDVVIAV GQAGGRTELS IERVAINVDD ARIADNAGAQ PIDAPIAKDG PVAYFSTLPI
KAIVRDMRAA GVPAMVSQTA GTFVCNHVFY GLMHVLAHRK AGSAAAPTRG GFIHIPYLPE
QAARHPGAPS LALDTLIAGL RVAVATSLST DADIREGGGQ LH